1pf5: Difference between revisions

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[[Image:1pf5.png|left|200px]]


{{STRUCTURE_1pf5|  PDB=1pf5  |  SCENE=  }}
==Structural Genomics, Protein YJGH==
 
<StructureSection load='1pf5' size='340' side='right'caption='[[1pf5]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
===Structural Genomics, Protein YJGH===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1pf5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1PF5 FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HG:MERCURY+(II)+ION'>HG</scene></td></tr>
[[1pf5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1PF5 OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1pf5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1pf5 OCA], [https://pdbe.org/1pf5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1pf5 RCSB], [https://www.ebi.ac.uk/pdbsum/1pf5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1pf5 ProSAT], [https://www.topsan.org/Proteins/MCSG/1pf5 TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/YJGH_ECOLI YJGH_ECOLI]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pf/1pf5_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1pf5 ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Escherichia coli]]
[[Category: Escherichia coli]]
[[Category: Edwards, A.]]
[[Category: Large Structures]]
[[Category: Joachimiak, A.]]
[[Category: Edwards A]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Joachimiak A]]
[[Category: Savchenko, A.]]
[[Category: Savchenko A]]
[[Category: Xu, L.]]
[[Category: Xu L]]
[[Category: Zhang, R.]]
[[Category: Zhang R]]
[[Category: Beta barrel]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]
[[Category: Unknown function]]

Latest revision as of 11:07, 14 February 2024

Structural Genomics, Protein YJGHStructural Genomics, Protein YJGH

Structural highlights

1pf5 is a 1 chain structure with sequence from Escherichia coli. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

YJGH_ECOLI

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1pf5, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA