1n1d: Difference between revisions

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[[Image:1n1d.png|left|200px]]


{{STRUCTURE_1n1d|  PDB=1n1d  |  SCENE=  }}
==Glycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerol==
 
<StructureSection load='1n1d' size='340' side='right'caption='[[1n1d]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
===Glycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerol===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1n1d]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1N1D FirstGlance]. <br>
{{ABSTRACT_PUBMED_14506262}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=C2G:[CYTIDINE-5-PHOSPHATE]+GLYCERYLPHOSPHORIC+ACID+ESTER'>C2G</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1n1d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1n1d OCA], [https://pdbe.org/1n1d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1n1d RCSB], [https://www.ebi.ac.uk/pdbsum/1n1d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1n1d ProSAT]</span></td></tr>
[[1n1d]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1N1D OCA].  
</table>
 
== Function ==
==Reference==
[https://www.uniprot.org/uniprot/TAGD_BACSU TAGD_BACSU] Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF.
<ref group="xtra">PMID:014506262</ref><references group="xtra"/>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/n1/1n1d_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1n1d ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacillus subtilis]]
[[Category: Bacillus subtilis]]
[[Category: Glycerol-3-phosphate cytidylyltransferase]]
[[Category: Large Structures]]
[[Category: Friesen, J A.]]
[[Category: Friesen JA]]
[[Category: Kent, C.]]
[[Category: Kent C]]
[[Category: Ludwig, M L.]]
[[Category: Ludwig ML]]
[[Category: Pattridge, K A.]]
[[Category: Pattridge KA]]
[[Category: Sankar, S.]]
[[Category: Sankar S]]
[[Category: Weber, C H.]]
[[Category: Weber CH]]
[[Category: Alpha/beta fold]]
[[Category: Cdp-glycerol]]
[[Category: Cytidylyltransferase]]
[[Category: Negative cooperativity]]
[[Category: Nucleotidyltransferase]]
[[Category: Transferase]]

Latest revision as of 10:51, 14 February 2024

Glycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerolGlycerol-3-phosphate cytidylyltransferase complexed with CDP-glycerol

Structural highlights

1n1d is a 4 chain structure with sequence from Bacillus subtilis. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

TAGD_BACSU Provides activated glycerol phosphate for teichoic acid synthesis, via incorporation into both the linkage unit and the teichoic acid polymer by TagB and TagF.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

1n1d, resolution 2.00Å

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OCA