2pnw: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(9 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2pnw.png|left|200px]]


{{STRUCTURE_2pnw|  PDB=2pnw  |  SCENE=  }}
==Crystal structure of membrane-bound lytic murein transglycosylase from Agrobacterium tumefaciens==
 
<StructureSection load='2pnw' size='340' side='right'caption='[[2pnw]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
===Crystal structure of membrane-bound lytic murein transglycosylase from Agrobacterium tumefaciens===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2pnw]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PNW OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PNW FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
[[2pnw]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PNW OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pnw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pnw OCA], [https://pdbe.org/2pnw PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pnw RCSB], [https://www.ebi.ac.uk/pdbsum/2pnw PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pnw ProSAT], [https://www.topsan.org/Proteins/NYSGXRC/2pnw TOPSAN]</span></td></tr>
[[Category: Agrobacterium tumefaciens str. c58]]
</table>
[[Category: Almo, S C.]]
== Function ==
[[Category: Bain, K T.]]
[https://www.uniprot.org/uniprot/A9CKT8_AGRFC A9CKT8_AGRFC]  
[[Category: Bonanno, J B.]]
== Evolutionary Conservation ==
[[Category: Burley, S K.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Dickey, M.]]
Check<jmol>
[[Category: Iizuka, M.]]
  <jmolCheckbox>
[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pn/2pnw_consurf.spt"</scriptWhenChecked>
[[Category: Ozyurt, S.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Sauder, J M.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Smith, D.]]
  </jmolCheckbox>
[[Category: Wasserman, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pnw ConSurf].
[[Category: Glycosylase]]
<div style="clear:both"></div>
[[Category: Hydrolase]]
__TOC__
[[Category: New york sgx research center for structural genomic]]
</StructureSection>
[[Category: Nysgxrc]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Protein structure initiative]]
[[Category: Large Structures]]
[[Category: Psi-2]]
[[Category: Almo SC]]
[[Category: Structural genomic]]
[[Category: Bain KT]]
[[Category: Bonanno JB]]
[[Category: Burley SK]]
[[Category: Dickey M]]
[[Category: Iizuka M]]
[[Category: Ozyurt S]]
[[Category: Sauder JM]]
[[Category: Smith D]]
[[Category: Wasserman S]]

Latest revision as of 12:10, 21 February 2024

Crystal structure of membrane-bound lytic murein transglycosylase from Agrobacterium tumefaciensCrystal structure of membrane-bound lytic murein transglycosylase from Agrobacterium tumefaciens

Structural highlights

2pnw is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CKT8_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pnw, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA