3mi4: Difference between revisions

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OCA

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-[[Image:3mi4.png|left|200px]]
-{{STRUCTURE_3mi4|  PDB=3mi4  |  SCENE=  }}
+==Bovine trypsin at 0.8 A resolution, non-restrained refinement==
+<StructureSection load='3mi4' size='340' side='right'caption='[[3mi4]], [[Resolution|resolution]] 0.80&Aring;' scene=''>
-===Bovine trypsin at 0.8 A resolution, non-restrained refinement===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3mi4]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MI4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3MI4 FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 0.8&#8491;</td></tr>
-==About this Structure==
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BEN:BENZAMIDINE'>BEN</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-[[3mi4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bos_taurus Bos taurus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3MI4 OCA].
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3mi4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3mi4 OCA], [https://pdbe.org/3mi4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3mi4 RCSB], [https://www.ebi.ac.uk/pdbsum/3mi4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3mi4 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/TRY1_BOVIN TRY1_BOVIN]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/mi/3mi4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3mi4 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Trypsin|Trypsin]]
+*[[Trypsin 3D structures|Trypsin 3D structures]]
+__TOC__
+</StructureSection>
 [[Category: Bos taurus]]
-[[Category: Trypsin]]
+[[Category: Large Structures]]
-[[Category: Brzuszkiewicz, A.]]
+[[Category: Brzuszkiewicz A]]
-[[Category: Dauter, M.]]
+[[Category: Dauter M]]
-[[Category: Dauter, Z.]]
+[[Category: Dauter Z]]
-[[Category: Hydrolase]]
-[[Category: Serine proteinase]]
-[[Category: Trypsin]]