1nmi: Difference between revisions

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-[[Image:1nmi.jpg|left|200px]]<br /><applet load="1nmi" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="1nmi" />
-'''Solution structure of the imidazole complex of iso-1 cytochrome c'''<br />
-==About this Structure==
+==Solution structure of the imidazole complex of iso-1 cytochrome c==
-NMI is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae] with <scene name='pdbligand=IMD:'>IMD</scene> and <scene name='pdbligand=HEC:'>HEC</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NMI OCA].
+<StructureSection load='1nmi' size='340' side='right'caption='[[1nmi]]' scene=''>
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1nmi]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1NMI OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1NMI FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 1 model</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEC:HEME+C'>HEC</scene>, <scene name='pdbligand=IMD:IMIDAZOLE'>IMD</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1nmi FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1nmi OCA], [https://pdbe.org/1nmi PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1nmi RCSB], [https://www.ebi.ac.uk/pdbsum/1nmi PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1nmi ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CYC1_YEAST CYC1_YEAST] Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nm/1nmi_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1nmi ConSurf].
+<div style="clear:both"></div>
+==See Also==
+*[[Cytochrome C 3D structures|Cytochrome C 3D structures]]
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Single protein]]
+[[Category: Liu G]]
-[[Category: Liu, G.]]
+[[Category: Tang W]]
-[[Category: Tang, W.]]
+[[Category: Tong Y]]
-[[Category: Tong, Y.]]
+[[Category: Wang J]]
-[[Category: Wang, J.]]
+[[Category: Yao Y]]
-[[Category: Yao, Y.]]
+[[Category: Zheng J]]
-[[Category: Zheng, J.]]
-[[Category: HEC]]
-[[Category: IMD]]
-[[Category: ligand-protein complex]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 14:07:39 2008''