3rrm: Difference between revisions

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-[[Image:3rrm.png|left|200px]]
-{{STRUCTURE_3rrm|  PDB=3rrm  |  SCENE=  }}
+==S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp==
+<StructureSection load='3rrm' size='340' side='right'caption='[[3rrm]], [[Resolution|resolution]] 2.90&Aring;' scene=''>
-===S. cerevisiae dbp5 l327v bound to nup159, gle1 h337r, ip6 and adp===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3rrm]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3pez 3pez]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RRM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3RRM FirstGlance]. <br>
-{{ABSTRACT_PUBMED_21441902}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.9&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ADP:ADENOSINE-5-DIPHOSPHATE'>ADP</scene>, <scene name='pdbligand=IHP:INOSITOL+HEXAKISPHOSPHATE'>IHP</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3rrm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3rrm OCA], [https://pdbe.org/3rrm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3rrm RCSB], [https://www.ebi.ac.uk/pdbsum/3rrm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3rrm ProSAT]</span></td></tr>
-[[3rrm]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Saccharomyces_cerevisiae Saccharomyces cerevisiae]. This structure supersedes the now removed PDB entry [http://oca.weizmann.ac.il/oca-bin/send-pdb?obs=1&id=3pez 3pez]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3RRM OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DBP5_YEAST DBP5_YEAST] ATP-dependent RNA helicase associated with the nuclear pore complex and essential for mRNA export from the nucleus. May participate in a terminal step of mRNA export through the removal of proteins that accompany mRNA through the nucleopore complex. Contributes to the blocking of bulk poly(A)+ mRNA export in ethanol-stressed cells. May also be involved in early transcription.<ref>PMID:9564047</ref> <ref>PMID:9564048</ref> <ref>PMID:10428971</ref> <ref>PMID:10610322</ref> <ref>PMID:10523319</ref> <ref>PMID:11350039</ref> <ref>PMID:12192043</ref> <ref>PMID:12686617</ref> <ref>PMID:15280434</ref> <ref>PMID:15574330</ref> <ref>PMID:15619606</ref>
 ==See Also==
-*[[Helicase|Helicase]]
+*[[Helicase 3D structures|Helicase 3D structures]]
-*[[Nucleoporin|Nucleoporin]]
+*[[Nucleoporin 3D structures|Nucleoporin 3D structures]]
+== References ==
-==Reference==
+<references/>
-<ref group="xtra">PMID:021441902</ref><references group="xtra"/>
+__TOC__
-[[Category: RNA helicase]]
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Saccharomyces cerevisiae]]
-[[Category: Berger, J M.]]
+[[Category: Berger JM]]
-[[Category: Helmke, K J.]]
+[[Category: Helmke KJ]]
-[[Category: Montpetit, B.]]
+[[Category: Montpetit B]]
-[[Category: Seeliger, M A.]]
+[[Category: Seeliger MA]]
-[[Category: Thomsen, N D.]]
+[[Category: Thomsen ND]]
-[[Category: Weis, K.]]
+[[Category: Weis K]]
-[[Category: Atpase]]
-[[Category: Beta-propeller]]
-[[Category: Dead-box]]
-[[Category: Heat-repeat]]
-[[Category: Helicase]]
-[[Category: Hydrolase]]
-[[Category: Mrna-export]]
-[[Category: Nuclear pore]]
-[[Category: Reca]]