1ly3: Difference between revisions

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-[[Image:1ly3.png|left|200px]]
-{{STRUCTURE_1ly3|  PDB=1ly3  |  SCENE=  }}
+==ANALYSIS OF QUINAZOLINE AND PYRIDOPYRIMIDINE N9-C10 REVERSED BRIDGE ANTIFOLATES IN COMPLEX WITH NADP+ AND PNEUMOCYSTIS CARINII DIHYDROFOLATE REDUCTASE==
+<StructureSection load='1ly3' size='340' side='right'caption='[[1ly3]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
-===ANALYSIS OF QUINAZOLINE AND PYRIDOPYRIMIDINE N9-C10 REVERSED BRIDGE ANTIFOLATES IN COMPLEX WITH NADP+ AND PNEUMOCYSTIS CARINII DIHYDROFOLATE REDUCTASE===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1ly3]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pneumocystis_carinii Pneumocystis carinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LY3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LY3 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_12198294}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=COG:2,4-DIAMINO-6-[N-(2,5-DIMETHOXYBENZYL)-N-METHYLAMINO]QUINAZOLINE'>COG</scene>, <scene name='pdbligand=NAP:NADP+NICOTINAMIDE-ADENINE-DINUCLEOTIDE+PHOSPHATE'>NAP</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ly3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ly3 OCA], [https://pdbe.org/1ly3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ly3 RCSB], [https://www.ebi.ac.uk/pdbsum/1ly3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ly3 ProSAT]</span></td></tr>
-[[1ly3]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pneumocystis_carinii Pneumocystis carinii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LY3 OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/DYR_PNECA DYR_PNECA] Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ly/1ly3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ly3 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Dihydrofolate reductase|Dihydrofolate reductase]]
+*[[Dihydrofolate reductase 3D structures|Dihydrofolate reductase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:012198294</ref><references group="xtra"/>
+[[Category: Large Structures]]
-[[Category: Dihydrofolate reductase]]
 [[Category: Pneumocystis carinii]]
-[[Category: Cody, V.]]
+[[Category: Cody V]]
-[[Category: Galitsky, N.]]
+[[Category: Galitsky N]]
-[[Category: Gangjee, A.]]
+[[Category: Gangjee A]]
-[[Category: Luft, J R.]]
+[[Category: Luft JR]]
-[[Category: Pangborn, W.]]
+[[Category: Pangborn W]]
-[[Category: Queener, S F.]]
+[[Category: Queener SF]]
-[[Category: Oxidoreductase]]
-[[Category: Pcdhfr reversed bridge antifolate]]