2hmc: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
m Protected "2hmc" [edit=sysop:move=sysop]
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:2hmc.png|left|200px]]


{{STRUCTURE_2hmc|  PDB=2hmc  |  SCENE=  }}
==The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens==
 
<StructureSection load='2hmc' size='340' side='right'caption='[[2hmc]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
===The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2hmc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HMC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2HMC FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[2hmc]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2HMC OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2hmc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2hmc OCA], [https://pdbe.org/2hmc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2hmc RCSB], [https://www.ebi.ac.uk/pdbsum/2hmc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2hmc ProSAT], [https://www.topsan.org/Proteins/MCSG/2hmc TOPSAN]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/A9CGZ4_AGRFC A9CGZ4_AGRFC]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hm/2hmc_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2hmc ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Dihydrodipicolinate Synthase|Dihydrodipicolinate Synthase]]
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
[[Category: Agrobacterium tumefaciens str. c58]]
__TOC__
[[Category: Joachimiak, A.]]
</StructureSection>
[[Category: Kim, Y.]]
[[Category: Agrobacterium fabrum str. C58]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Large Structures]]
[[Category: Savchenko, A.]]
[[Category: Joachimiak A]]
[[Category: Xu, X.]]
[[Category: Kim Y]]
[[Category: Zhang, R.]]
[[Category: Savchenko A]]
[[Category: Zheng, H.]]
[[Category: Xu X]]
[[Category: Mcsg]]
[[Category: Zhang R]]
[[Category: Midwest center for structural genomic]]
[[Category: Zheng H]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]
[[Category: Unknown function]]

Latest revision as of 11:08, 30 October 2024

The Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciensThe Crystal Structure of Dihydrodipicolinate Synthase DapA from Agrobacterium tumefaciens

Structural highlights

2hmc is a 1 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.9Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CGZ4_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2hmc, resolution 1.90Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA