2yvv: Difference between revisions

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[[Image:2yvv.png|left|200px]]


{{STRUCTURE_2yvv|  PDB=2yvv  |  SCENE=  }}
==Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites==
 
<StructureSection load='2yvv' size='340' side='right'caption='[[2yvv]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
===Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2yvv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YVV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2YVV FirstGlance]. <br>
 
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
==About this Structure==
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=PRD_900008:alpha-lactose'>PRD_900008</scene></td></tr>
[[2yvv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes Streptococcus pyogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2YVV OCA].  
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2yvv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2yvv OCA], [https://pdbe.org/2yvv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2yvv RCSB], [https://www.ebi.ac.uk/pdbsum/2yvv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2yvv ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/Q9A0M7_STRP1 Q9A0M7_STRP1]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/yv/2yvv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2yvv ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Hyaluronidase|Hyaluronidase]]
*[[Hyaluronidase 3D structures|Hyaluronidase 3D structures]]
[[Category: Hyaluronate lyase]]
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pyogenes]]
[[Category: Streptococcus pyogenes]]
[[Category: Betzel, C.]]
[[Category: Betzel C]]
[[Category: Bhakuni, V.]]
[[Category: Bhakuni V]]
[[Category: Kaur, P.]]
[[Category: Kaur P]]
[[Category: Kumar, R Prem.]]
[[Category: Mishra P]]
[[Category: Mishra, P.]]
[[Category: Perbandt M]]
[[Category: Perbandt, M.]]
[[Category: Prem Kumar R]]
[[Category: Sharma, S.]]
[[Category: Sharma S]]
[[Category: Singh, N.]]
[[Category: Singh N]]
[[Category: Singh, T P.]]
[[Category: Singh TP]]
[[Category: Complex]]
[[Category: Hyaluronan lyase]]
[[Category: Hyaluronidase]]
[[Category: Lactose]]
[[Category: Lyase]]

Latest revision as of 12:06, 25 October 2023

Crystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sitesCrystal structure of hyluranidase complexed with lactose at 2.6 A resolution reveals three specific sugar recognition sites

Structural highlights

2yvv is a 1 chain structure with sequence from Streptococcus pyogenes. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.6Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q9A0M7_STRP1

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

2yvv, resolution 2.60Å

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Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA