2h2j: Difference between revisions

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[[Image:2h2j.png|left|200px]]


{{STRUCTURE_2h2j|  PDB=2h2j  |  SCENE=  }}
==Structure of Rubisco LSMT bound to Sinefungin and Monomethyllysine==
 
<StructureSection load='2h2j' size='340' side='right'caption='[[2h2j]], [[Resolution|resolution]] 2.45&Aring;' scene=''>
===Structure of Rubisco LSMT bound to Sinefungin and Monomethyllysine===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[2h2j]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Pisum_sativum Pisum sativum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H2J OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2H2J FirstGlance]. <br>
{{ABSTRACT_PUBMED_16682405}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.45&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MLZ:N-METHYL-LYSINE'>MLZ</scene>, <scene name='pdbligand=SFG:SINEFUNGIN'>SFG</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2h2j FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2h2j OCA], [https://pdbe.org/2h2j PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2h2j RCSB], [https://www.ebi.ac.uk/pdbsum/2h2j PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2h2j ProSAT]</span></td></tr>
[[2h2j]] is a 3 chain structure of [[RuBisCO]] with sequence from [http://en.wikipedia.org/wiki/Pisum_sativum Pisum sativum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2H2J OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/RBCMT_PEA RBCMT_PEA] Methylates 'Lys-14' of the large subunit of RuBisCO. Can also use with lower efficiency chloroplastic fructose-bisphosphate aldolases and gamma-tocopherol methyltransferase as substrates, but not a cytosolic aldolase.<ref>PMID:22547063</ref>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/h2/2h2j_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2h2j ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[RuBisCO|RuBisCO]]
*[[RuBisCO 3D structures|RuBisCO 3D structures]]
 
== References ==
==Reference==
<references/>
<ref group="xtra">PMID:016682405</ref><references group="xtra"/>
__TOC__
</StructureSection>
[[Category: Large Structures]]
[[Category: Pisum sativum]]
[[Category: Pisum sativum]]
[[Category: Couture, J F.]]
[[Category: Couture JF]]
[[Category: Hauk, G.]]
[[Category: Hauk G]]
[[Category: Trievel, R C.]]
[[Category: Trievel RC]]
[[Category: Protein lysine methyltransferase]]
[[Category: Set domain]]
[[Category: Transferase]]

Latest revision as of 12:30, 14 February 2024

Structure of Rubisco LSMT bound to Sinefungin and MonomethyllysineStructure of Rubisco LSMT bound to Sinefungin and Monomethyllysine

Structural highlights

2h2j is a 3 chain structure with sequence from Pisum sativum. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.45Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

RBCMT_PEA Methylates 'Lys-14' of the large subunit of RuBisCO. Can also use with lower efficiency chloroplastic fructose-bisphosphate aldolases and gamma-tocopherol methyltransferase as substrates, but not a cytosolic aldolase.[1]

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

References

  1. ↑ Mininno M, Brugiere S, Pautre V, Gilgen A, Ma S, Ferro M, Tardif M, Alban C, Ravanel S. Characterization of chloroplastic fructose 1,6-bisphosphate aldolases as lysine-methylated proteins in plants. J Biol Chem. 2012 Jun 15;287(25):21034-44. doi: 10.1074/jbc.M112.359976. Epub, 2012 Apr 30. PMID:22547063 doi:http://dx.doi.org/10.1074/jbc.M112.359976

2h2j, resolution 2.45Å

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