1r2n: Difference between revisions

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-[[Image:1r2n.png|left|200px]]
-{{STRUCTURE_1r2n|  PDB=1r2n  |  SCENE=  }}
+==NMR structure of the all-trans retinal in dark-adapted Bacteriorhodopsin==
+<StructureSection load='1r2n' size='340' side='right'caption='[[1r2n]]' scene=''>
-===NMR structure of the all-trans retinal in dark-adapted Bacteriorhodopsin===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1r2n]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R2N OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1R2N FirstGlance]. <br>
-{{ABSTRACT_PUBMED_12119389}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=RET:RETINAL'>RET</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1r2n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1r2n OCA], [https://pdbe.org/1r2n PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1r2n RCSB], [https://www.ebi.ac.uk/pdbsum/1r2n PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1r2n ProSAT]</span></td></tr>
-[[1r2n]] is a 1 chain structure of [[Bacteriorhodopsin]] with sequence from [http://en.wikipedia.org/wiki/Halobacterium_salinarum Halobacterium salinarum]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1R2N OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/BACR_HALSA BACR_HALSA] Light-driven proton pump.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r2/1r2n_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1r2n ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Bacteriorhodopsin|Bacteriorhodopsin]]
+*[[Bacteriorhodopsin 3D structures|Bacteriorhodopsin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:012119389</ref><references group="xtra"/>
 [[Category: Halobacterium salinarum]]
-[[Category: Kessler, B.]]
+[[Category: Large Structures]]
-[[Category: Kuhne, R.]]
+[[Category: Kessler B]]
-[[Category: Oesterhaelt, D.]]
+[[Category: Kuhne R]]
-[[Category: Oschkinat, H.]]
+[[Category: Oesterhaelt D]]
-[[Category: Patzelt, H.]]
+[[Category: Oschkinat H]]
-[[Category: Schmieder, P.]]
+[[Category: Patzelt H]]
-[[Category: Simon, B.]]
+[[Category: Schmieder P]]
-[[Category: TerLaak, A.]]
+[[Category: Simon B]]
-[[Category: Haloarchaea]]
+[[Category: TerLaak A]]
-[[Category: Membrane protein]]
-[[Category: Photoreceptor]]
-[[Category: Proton pump]]
-[[Category: Proton transport]]
-[[Category: Retinal protein]]