2r1g: Difference between revisions

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OCA

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-[[Image:2r1g.png|left|200px]]
-{{STRUCTURE_2r1g|  PDB=2r1g  |  SCENE=  }}
+==Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex==
+<SX load='2r1g' size='340' side='right' viewer='molstar' caption='[[2r1g]], [[Resolution|resolution]] 12.50&Aring;' scene=''>
-===Coordinates of the thermus thermophilus 30S components neighboring RbfA as obtained by fitting into the CRYO-EM map of A 30S-RBFA complex===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2r1g]] is a 10 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB27 Thermus thermophilus HB27] and [https://en.wikipedia.org/wiki/Synthetic_construct Synthetic construct]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1G OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2R1G FirstGlance]. <br>
-{{ABSTRACT_PUBMED_17996707}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Electron Microscopy, [[Resolution|Resolution]] 12.5&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2r1g FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2r1g OCA], [https://pdbe.org/2r1g PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2r1g RCSB], [https://www.ebi.ac.uk/pdbsum/2r1g PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2r1g ProSAT]</span></td></tr>
-==About this Structure==
+</table>
-[[2r1g]] is a 10 chain structure of [[Ribosomal protein S12]], [[Ribosomal protein S13]] and [[Ribosomal protein S9]] with sequence from [http://en.wikipedia.org/wiki/Thermus_thermophilus Thermus thermophilus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2R1G OCA].
+== Function ==
+[https://www.uniprot.org/uniprot/RS9_THET2 RS9_THET2] Part of the top of the head of the 30S subunit. The C-terminal region penetrates the head emerging in the P-site where it contacts tRNA (By similarity).
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/r1/2r1g_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2r1g ConSurf].
+<div style="clear:both"></div>
 ==See Also==
@@ Line 14: / Line 24: @@
 *[[Ribosomal protein S13|Ribosomal protein S13]]
 *[[Ribosomal protein S9|Ribosomal protein S9]]
+__TOC__
-==Reference==
+</SX>
-<ref group="xtra">PMID:017996707</ref><ref group="xtra">PMID:011014170</ref><references group="xtra"/>
+[[Category: Large Structures]]
-[[Category: Thermus thermophilus]]
+[[Category: Synthetic construct]]
-[[Category: Agrawal, R K.]]
+[[Category: Thermus thermophilus HB27]]
-[[Category: Booth, T M.]]
+[[Category: Agrawal RK]]
-[[Category: Datta, P P.]]
+[[Category: Booth TM]]
-[[Category: Fucini, P.]]
+[[Category: Datta PP]]
-[[Category: Kaminishi, T.]]
+[[Category: Fucini P]]
-[[Category: Kawazoe, M.]]
+[[Category: Kaminishi T]]
-[[Category: Sharma, M R.]]
+[[Category: Kawazoe M]]
-[[Category: Swami, N K.]]
+[[Category: Sharma MR]]
-[[Category: Takemoto, C.]]
+[[Category: Swami NK]]
-[[Category: Wilson, D N.]]
+[[Category: Takemoto C]]
-[[Category: Yokoyama, S.]]
+[[Category: Wilson DN]]
-[[Category: 30s ribosome maturation protein rbfa]]
+[[Category: Yokoyama S]]
-[[Category: 30s-rbfa complex]]
-[[Category: Antibiotic resistance]]
-[[Category: Cold shock response protein rbfa]]
-[[Category: Rbfa binding site on the 30]]
-[[Category: Ribonucleoprotein]]
-[[Category: Ribosomal protein]]
-[[Category: Ribosomal protein-rna complex]]
-[[Category: Rna-binding]]
-[[Category: Rrna-binding]]
-[[Category: Trna-binding]]