1vxc: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1vxc.png|left|200px]]
-{{STRUCTURE_1vxc|  PDB=1vxc  |  SCENE=  }}
+==NATIVE SPERM WHALE MYOGLOBIN==
+<StructureSection load='1vxc' size='340' side='right'caption='[[1vxc]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-===NATIVE SPERM WHALE MYOGLOBIN===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1vxc]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VXC OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1VXC FirstGlance]. <br>
-{{ABSTRACT_PUBMED_8642596}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CMO:CARBON+MONOXIDE'>CMO</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1vxc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vxc OCA], [https://pdbe.org/1vxc PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1vxc RCSB], [https://www.ebi.ac.uk/pdbsum/1vxc PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1vxc ProSAT]</span></td></tr>
-[[1vxc]] is a 1 chain structure of [[Myoglobin]] with sequence from [http://en.wikipedia.org/wiki/Physeter_catodon Physeter catodon]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VXC OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/MYG_PHYMC MYG_PHYMC] Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/vx/1vxc_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1vxc ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Myoglobin|Myoglobin]]
+*[[Myoglobin 3D structures|Myoglobin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:008642596</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Physeter catodon]]
-[[Category: Phillips, G N.]]
+[[Category: Phillips Jr GN]]
-[[Category: Yang, F.]]
+[[Category: Yang F]]
-[[Category: Conformational change]]
-[[Category: Oxygen storage]]
-[[Category: Ph value]]
-[[Category: Sperm whale myoglobin]]