1dd3: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1dd3.png|left|200px]]
-{{STRUCTURE_1dd3|  PDB=1dd3  |  SCENE=  }}
+==CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA==
+<StructureSection load='1dd3' size='340' side='right'caption='[[1dd3]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-===CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L12 FROM THERMOTOGA MARITIMA===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1dd3]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DD3 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1DD3 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_10637222}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1dd3 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1dd3 OCA], [https://pdbe.org/1dd3 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1dd3 RCSB], [https://www.ebi.ac.uk/pdbsum/1dd3 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1dd3 ProSAT]</span></td></tr>
-==About this Structure==
+</table>
-[[1dd3]] is a 4 chain structure of [[Ribosomal protein L7]] with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1DD3 OCA].
+== Function ==
+[https://www.uniprot.org/uniprot/RL7_THEMA RL7_THEMA] Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dd/1dd3_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1dd3 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Ribosomal protein L7|Ribosomal protein L7]]
+*[[Ribosomal protein L7/L12|Ribosomal protein L7/L12]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:010637222</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Thermotoga maritima]]
-[[Category: Bartunik, H D.]]
+[[Category: Bartunik HD]]
-[[Category: Bourenkov, G P.]]
+[[Category: Bourenkov GP]]
-[[Category: Huber, R.]]
+[[Category: Huber R]]
-[[Category: Wahl, M C.]]
+[[Category: Wahl MC]]
-[[Category: Alpha-beta structure]]
-[[Category: Dimer formation]]
-[[Category: Domain]]
-[[Category: Five-helix- bundle]]
-[[Category: Flexibility]]
-[[Category: Four-helix-bundle]]
-[[Category: Helical hairpin]]
-[[Category: Hinge region]]
-[[Category: Ribosome]]