1b67: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(11 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:1b67.png|left|200px]]


{{STRUCTURE_1b67|  PDB=1b67  |  SCENE=  }}
==CRYSTAL STRUCTURE OF THE HISTONE HMFA FROM METHANOTHERMUS FERVIDUS==
 
<StructureSection load='1b67' size='340' side='right'caption='[[1b67]], [[Resolution|resolution]] 1.48&Aring;' scene=''>
===CRYSTAL STRUCTURE OF THE HISTONE HMFA FROM METHANOTHERMUS FERVIDUS===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[1b67]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanothermus_fervidus Methanothermus fervidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B67 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1B67 FirstGlance]. <br>
{{ABSTRACT_PUBMED_11021968}}
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.48&#8491;</td></tr>
 
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
==About this Structure==
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1b67 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1b67 OCA], [https://pdbe.org/1b67 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1b67 RCSB], [https://www.ebi.ac.uk/pdbsum/1b67 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1b67 ProSAT]</span></td></tr>
[[1b67]] is a 2 chain structure of [[Histone]] with sequence from [http://en.wikipedia.org/wiki/Methanothermus_fervidus Methanothermus fervidus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1B67 OCA].  
</table>
== Function ==
[https://www.uniprot.org/uniprot/HMFA_METFE HMFA_METFE] Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/b6/1b67_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1b67 ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Archaeal Histones|Archaeal Histones]]
*[[Histone 3D structures|Histone 3D structures]]
*[[Histone|Histone]]
__TOC__
 
</StructureSection>
==Reference==
[[Category: Large Structures]]
<ref group="xtra">PMID:011021968</ref><ref group="xtra">PMID:015048824</ref><references group="xtra"/>
[[Category: Methanothermus fervidus]]
[[Category: Methanothermus fervidus]]
[[Category: Decanniere, K.]]
[[Category: Decanniere K]]
[[Category: Heinemann, U.]]
[[Category: Heinemann U]]
[[Category: Reeve, J N.]]
[[Category: Reeve JN]]
[[Category: Sandman, K.]]
[[Category: Sandman K]]
[[Category: Dna binding protein]]
[[Category: Histone]]
[[Category: Hmf1]]

Latest revision as of 08:55, 3 April 2024

CRYSTAL STRUCTURE OF THE HISTONE HMFA FROM METHANOTHERMUS FERVIDUSCRYSTAL STRUCTURE OF THE HISTONE HMFA FROM METHANOTHERMUS FERVIDUS

Structural highlights

1b67 is a 2 chain structure with sequence from Methanothermus fervidus. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.48Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

HMFA_METFE Binds and compact DNA (95 to 150 base pairs) to form nucleosome-like structures that contain positive DNA supercoils. Increases the resistance of DNA to thermal denaturation.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

1b67, resolution 1.48Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA