2dyk: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
No edit summary |
||
| (8 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
==Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8== | |||
<StructureSection load='2dyk' size='340' side='right'caption='[[2dyk]], [[Resolution|resolution]] 1.96Å' scene=''> | |||
== Structural highlights == | |||
<table><tr><td colspan='2'>[[2dyk]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Thermus_thermophilus_HB8 Thermus thermophilus HB8]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DYK OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2DYK FirstGlance]. <br> | |||
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.96Å</td></tr> | |||
== | <tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GDP:GUANOSINE-5-DIPHOSPHATE'>GDP</scene></td></tr> | ||
[[2dyk]] is a 2 chain structure | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2dyk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2dyk OCA], [https://pdbe.org/2dyk PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2dyk RCSB], [https://www.ebi.ac.uk/pdbsum/2dyk PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2dyk ProSAT], [https://www.topsan.org/Proteins/RSGI/2dyk TOPSAN]</span></td></tr> | ||
</table> | |||
== Function == | |||
[https://www.uniprot.org/uniprot/Q5SIH8_THET8 Q5SIH8_THET8] GTPase that plays an essential role in the late steps of ribosome biogenesis.[HAMAP-Rule:MF_00195][RuleBase:RU004481] | |||
== Evolutionary Conservation == | |||
[[Image:Consurf_key_small.gif|200px|right]] | |||
Check<jmol> | |||
<jmolCheckbox> | |||
<scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/dy/2dyk_consurf.spt"</scriptWhenChecked> | |||
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | |||
<text>to colour the structure by Evolutionary Conservation</text> | |||
</jmolCheckbox> | |||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2dyk ConSurf]. | |||
<div style="clear:both"></div> | |||
==See Also== | ==See Also== | ||
*[[GTP-binding protein|GTP-binding protein]] | *[[GTP-binding protein 3D structures|GTP-binding protein 3D structures]] | ||
[[Category: | __TOC__ | ||
[[Category: | </StructureSection> | ||
[[Category: | [[Category: Large Structures]] | ||
[[Category: | [[Category: Thermus thermophilus HB8]] | ||
[[Category: Shirouzu | [[Category: Fusatomi E]] | ||
[[Category: Takemoto | [[Category: Kawazoe M]] | ||
[[Category: Terada | [[Category: Shirouzu M]] | ||
[[Category: Yokoyama | [[Category: Takemoto C]] | ||
[[Category: Terada T]] | |||
[[Category: Yokoyama S]] | |||
Latest revision as of 11:32, 25 October 2023
Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8Crystal structure of N-terminal GTP-binding domain of EngA from Thermus thermophilus HB8
Structural highlights
FunctionQ5SIH8_THET8 GTPase that plays an essential role in the late steps of ribosome biogenesis.[HAMAP-Rule:MF_00195][RuleBase:RU004481] Evolutionary Conservation Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf. See Also |
| ||||||||||||||||||