3cy5: Difference between revisions

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-[[Image:3cy5.png|left|200px]]
-{{STRUCTURE_3cy5|  PDB=3cy5  |  SCENE=  }}
+==Crystal structure determination of buffalo (Bubalus bubalis) hemoglobin at 2 angstrom resolution==
+<StructureSection load='3cy5' size='340' side='right'caption='[[3cy5]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-===Crystal structure determination of buffalo (Bubalus bubalis) hemoglobin at 2 angstrom resolution===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[3cy5]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CY5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3CY5 FirstGlance]. <br>
-{{ABSTRACT_PUBMED_17909297}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3cy5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3cy5 OCA], [https://pdbe.org/3cy5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3cy5 RCSB], [https://www.ebi.ac.uk/pdbsum/3cy5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3cy5 ProSAT]</span></td></tr>
-[[3cy5]] is a 4 chain structure of [[Hemoglobin]] with sequence from [http://en.wikipedia.org/wiki/Bubalus_bubalis Bubalus bubalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3CY5 OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/HBA2_BUBBU HBA2_BUBBU] Involved in oxygen transport from the lung to the various peripheral tissues.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/cy/3cy5_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3cy5 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Hemoglobin|Hemoglobin]]
+*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:017909297</ref><ref group="xtra">PMID:019255493</ref><ref group="xtra">PMID:019200047</ref><ref group="xtra">PMID:019356147</ref><references group="xtra"/>
 [[Category: Bubalus bubalis]]
-[[Category: Balasubramanian, M.]]
+[[Category: Large Structures]]
-[[Category: Moorthy, Pon Sathya.]]
+[[Category: Balasubramanian M]]
-[[Category: Neelagandan, K.]]
+[[Category: Neelagandan K]]
-[[Category: Ponnuswamy, M N.]]
+[[Category: Ponnuswamy MN]]
-[[Category: Bb phenotype]]
+[[Category: Sathya Moorthy P]]
-[[Category: Bubalus bubali]]
-[[Category: Heme]]
-[[Category: Iron]]
-[[Category: Low oxygen-affinity]]
-[[Category: Methemoglobin]]
-[[Category: Orthorhombic]]
-[[Category: Oxygen storage]]
-[[Category: Oxygen transport]]
-[[Category: Transport]]