1ced: Difference between revisions

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OCA

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-[[Image:1ced.jpg|left|200px]]<br /><applet load="1ced" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="1ced" />
-'''THE STRUCTURE OF CYTOCHROME C6 FROM MONORAPHIDIUM BRAUNII, NMR, MINIMIZED AVERAGE STRUCTURE'''<br />
-==About this Structure==
+==THE STRUCTURE OF CYTOCHROME C6 FROM MONORAPHIDIUM BRAUNII, NMR, MINIMIZED AVERAGE STRUCTURE==
-CED is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Monoraphidium_braunii Monoraphidium braunii] with <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CED OCA].
+<StructureSection load='1ced' size='340' side='right'caption='[[1ced]]' scene=''>
-[[Category: Monoraphidium braunii]]
+== Structural highlights ==
-[[Category: Single protein]]
+<table><tr><td colspan='2'>[[1ced]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Chlorolobion_braunii Chlorolobion braunii]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1CED OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1CED FirstGlance]. <br>
-[[Category: Banci, L.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR, 20 models</td></tr>
-[[Category: Bertini, I.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-[[Category: Diaz, A.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1ced FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1ced OCA], [https://pdbe.org/1ced PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1ced RCSB], [https://www.ebi.ac.uk/pdbsum/1ced PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1ced ProSAT]</span></td></tr>
-[[Category: Hervas, M.]]
+</table>
-[[Category: Quacquarini, G.]]
+== Function ==
-[[Category: Rosa, M A.De La.]]
+[https://www.uniprot.org/uniprot/CYC6_CHLBR CYC6_CHLBR] Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.
-[[Category: Walter, O.]]
+== Evolutionary Conservation ==
-[[Category: HEM]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: chloroplast]]
+Check<jmol>
-[[Category: electron transport]]
+  <jmolCheckbox>
-[[Category: heme protein]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ce/1ced_consurf.spt"</scriptWhenChecked>
-[[Category: thylakoid membrane]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 12:05:13 2008''
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1ced ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Chlorolobion braunii]]
+[[Category: Large Structures]]
+[[Category: Banci L]]
+[[Category: Bertini I]]
+[[Category: De La Rosa MA]]
+[[Category: Diaz A]]
+[[Category: Hervas M]]
+[[Category: Quacquarini G]]
+[[Category: Walter O]]