2kkv: Difference between revisions

← Older edit

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2kkv.png|left|200px]]
-{{STRUCTURE_2kkv|  PDB=2kkv  |  SCENE=  }}
+==Solution NMR structure of an integrase domain from protein SPA4288 from Salmonella enterica, Northeast Structural Genomics Consortium Target SlR105H==
+<StructureSection load='2kkv' size='340' side='right'caption='[[2kkv]]' scene=''>
-===Solution NMR structure of an integrase domain from protein SPA4288 from Salmonella enterica, Northeast Structural Genomics Consortium Target SlR105H===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[2kkv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A Salmonella enterica subsp. enterica serovar Paratyphi A]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KKV FirstGlance]. <br>
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kkv OCA], [https://pdbe.org/2kkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kkv RCSB], [https://www.ebi.ac.uk/pdbsum/2kkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kkv ProSAT], [https://www.topsan.org/Proteins/NESGC/2kkv TOPSAN]</span></td></tr>
-[[2kkv]] is a 1 chain structure of [[Phage integrase]] with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_paratyphi_a Salmonella enterica subsp. enterica serovar paratyphi a]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKV OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/A0A0H2WUU6_SALPA A0A0H2WUU6_SALPA]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kkv_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kkv ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Phage integrase|Phage integrase]]
+*[[Retroviral integrase 3D structures|Retroviral integrase 3D structures]]
-[[Category: Salmonella enterica subsp. enterica serovar paratyphi a]]
+__TOC__
-[[Category: Acton, T B.]]
+</StructureSection>
-[[Category: Belote, R L.]]
+[[Category: Large Structures]]
-[[Category: Ciccosanti, C.]]
+[[Category: Salmonella enterica subsp. enterica serovar Paratyphi A]]
-[[Category: Everett, J K.]]
+[[Category: Acton TB]]
-[[Category: Jiang, M.]]
+[[Category: Belote RL]]
-[[Category: Mills, J L.]]
+[[Category: Ciccosanti C]]
-[[Category: Montelione, G T.]]
+[[Category: Everett JK]]
-[[Category: NESG, Northeast Structural Genomics Consortium.]]
+[[Category: Jiang M]]
-[[Category: Nair, R.]]
+[[Category: Mills JL]]
-[[Category: Rost, B.]]
+[[Category: Montelione GT]]
-[[Category: Sukumaran, D K.]]
+[[Category: Nair R]]
-[[Category: Swapna, G V.T.]]
+[[Category: Rost B]]
-[[Category: Szyperski, T.]]
+[[Category: Sukumaran DK]]
-[[Category: Wu, Y.]]
+[[Category: Swapna GVT]]
-[[Category: Xiao, R.]]
+[[Category: Szyperski T]]
-[[Category: Dna binding protein]]
+[[Category: Wu Y]]
-[[Category: Nesgc]]
+[[Category: Xiao R]]
-[[Category: Northeast structural genomics consortium]]
-[[Category: Protein structure]]
-[[Category: Protein structure initiative]]
-[[Category: Psi]]
-[[Category: Structural genomic]]