3fnb: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(6 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3fnb.png|left|200px]]


{{STRUCTURE_3fnb|  PDB=3fnb  |  SCENE=  }}
==Crystal structure of acylaminoacyl peptidase SMU_737 from Streptococcus mutans UA159==
 
<StructureSection load='3fnb' size='340' side='right'caption='[[3fnb]], [[Resolution|resolution]] 2.12&Aring;' scene=''>
===Crystal structure of acylaminoacyl peptidase SMU_737 from Streptococcus mutans UA159===
== Structural highlights ==
 
<table><tr><td colspan='2'>[[3fnb]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Strmu Strmu]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FNB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3FNB FirstGlance]. <br>
 
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene></td></tr>
==About this Structure==
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[3fnb]] is a 2 chain structure of [[Acylaminoacyl peptidase]] with sequence from [http://en.wikipedia.org/wiki/Streptococcus_mutans Streptococcus mutans]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3FNB OCA].  
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SMU_737 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=210007 STRMU])</td></tr>
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3fnb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3fnb OCA], [https://pdbe.org/3fnb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3fnb RCSB], [https://www.ebi.ac.uk/pdbsum/3fnb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3fnb ProSAT], [https://www.topsan.org/Proteins/MCSG/3fnb TOPSAN]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/fn/3fnb_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3fnb ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Acylaminoacyl peptidase|Acylaminoacyl peptidase]]
*[[Acylaminoacyl peptidase 3D structures|Acylaminoacyl peptidase 3D structures]]
[[Category: Streptococcus mutans]]
__TOC__
[[Category: Cobb, G.]]
</StructureSection>
[[Category: Hatzos, C.]]
[[Category: Large Structures]]
[[Category: Joachimiak, A.]]
[[Category: Strmu]]
[[Category: Kim, Y.]]
[[Category: Cobb, G]]
[[Category: MCSG, Midwest Center for Structural Genomics.]]
[[Category: Hatzos, C]]
[[Category: Joachimiak, A]]
[[Category: Kim, Y]]
[[Category: Structural genomic]]
[[Category: Alpha-beta-alpha sandwich]]
[[Category: Alpha-beta-alpha sandwich]]
[[Category: Helix bundle]]
[[Category: Helix bundle]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Mcsg]]
[[Category: Mcsg]]
[[Category: Midwest center for structural genomic]]
[[Category: PSI, Protein structure initiative]]
[[Category: Protein structure initiative]]
[[Category: Psi-2]]
[[Category: Structural genomic]]

Latest revision as of 11:05, 2 March 2022

Crystal structure of acylaminoacyl peptidase SMU_737 from Streptococcus mutans UA159Crystal structure of acylaminoacyl peptidase SMU_737 from Streptococcus mutans UA159

Structural highlights

3fnb is a 2 chain structure with sequence from Strmu. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:, , ,
NonStd Res:
Gene:SMU_737 (STRMU)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3fnb, resolution 2.12Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA