1uby: Difference between revisions

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-[[Image:1uby.png|left|200px]]
-{{STRUCTURE_1uby|  PDB=1uby  |  SCENE=  }}
+==STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE==
+<StructureSection load='1uby' size='340' side='right'caption='[[1uby]], [[Resolution|resolution]] 2.40&Aring;' scene=''>
-===STRUCTURE OF FARNESYL PYROPHOSPHATE SYNTHETASE===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1uby]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UBY OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1UBY FirstGlance]. <br>
-{{ABSTRACT_PUBMED_8986756}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.4&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=DMA:DIMETHYLALLYL+DIPHOSPHATE'>DMA</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1uby FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uby OCA], [https://pdbe.org/1uby PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1uby RCSB], [https://www.ebi.ac.uk/pdbsum/1uby PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1uby ProSAT]</span></td></tr>
-[[1uby]] is a 1 chain structure of [[Farnesyl diphosphate synthase]] with sequence from [http://en.wikipedia.org/wiki/Gallus_gallus Gallus gallus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UBY OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/FPPS_CHICK FPPS_CHICK] Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ub/1uby_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1uby ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Farnesyl diphosphate synthase|Farnesyl diphosphate synthase]]
+*[[Farnesyl diphosphate synthase 3D structures|Farnesyl diphosphate synthase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:008986756</ref><references group="xtra"/>
-[[Category: Dimethylallyltranstransferase]]
 [[Category: Gallus gallus]]
-[[Category: Poulter, C D.]]
+[[Category: Large Structures]]
-[[Category: Proteau, P.]]
+[[Category: Poulter CD]]
-[[Category: Sacchettini, J C.]]
+[[Category: Proteau P]]
-[[Category: Tarshis, L C.]]
+[[Category: Sacchettini JC]]
-[[Category: Cholesterol biosynthesis]]
+[[Category: Tarshis LC]]
-[[Category: Isoprene biosynthesis]]
-[[Category: Transferase]]