1qwl: Difference between revisions

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-[[Image:1qwl.png|left|200px]]
-{{STRUCTURE_1qwl|  PDB=1qwl  |  SCENE=  }}
+==Structure of Helicobacter pylori catalase==
+<StructureSection load='1qwl' size='340' side='right'caption='[[1qwl]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-===Structure of Helicobacter pylori catalase===
+== Structural highlights ==
+<table><tr><td colspan='2'>[[1qwl]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QWL OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1QWL FirstGlance]. <br>
-{{ABSTRACT_PUBMED_15023060}}
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.6&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=AZI:AZIDE+ION'>AZI</scene>, <scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene>, <scene name='pdbligand=OXY:OXYGEN+MOLECULE'>OXY</scene></td></tr>
-==About this Structure==
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1qwl FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1qwl OCA], [https://pdbe.org/1qwl PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1qwl RCSB], [https://www.ebi.ac.uk/pdbsum/1qwl PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1qwl ProSAT]</span></td></tr>
-[[1qwl]] is a 2 chain structure of [[Catalase]] with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori Helicobacter pylori]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1QWL OCA].
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/CATA_HELPY CATA_HELPY] Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/qw/1qwl_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1qwl ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Catalase|Catalase]]
+*[[Catalase 3D structures|Catalase 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:015023060</ref><references group="xtra"/>
-[[Category: Catalase]]
 [[Category: Helicobacter pylori]]
-[[Category: Carpena, X.]]
+[[Category: Large Structures]]
-[[Category: Fita, I.]]
+[[Category: Carpena X]]
-[[Category: Haas, R.]]
+[[Category: Fita I]]
-[[Category: Loewen, P C.]]
+[[Category: Haas R]]
-[[Category: Nicholls, P.]]
+[[Category: Loewen PC]]
-[[Category: Obenbreit, S.]]
+[[Category: Nicholls P]]
-[[Category: Perez-Luque, R.]]
+[[Category: Obenbreit S]]
-[[Category: Rovira, C.]]
+[[Category: Perez-Luque R]]
-[[Category: Azide complex]]
+[[Category: Rovira C]]
-[[Category: Beta barrel]]
-[[Category: Oxidoreductase]]
-[[Category: Oxyferryl complex]]