4eep: Difference between revisions

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-[[Image:4eep.png|left|200px]]
-<!--
+==Crystal structure of LOV2 domain of Arabidopsis thaliana phototropin 2==
-The line below this paragraph, containing "STRUCTURE_4eep", creates the "Structure Box" on the page.
+<StructureSection load='4eep' size='340' side='right'caption='[[4eep]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[4eep]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. The March 2015 RCSB PDB [https://pdb.rcsb.org/pdb/static.do?p=education_discussion/molecule_of_the_month/index.html Molecule of the Month] feature on ''Phototropin''  by David Goodsell is [https://dx.doi.org/10.2210/rcsb_pdb/mom_2015_3 10.2210/rcsb_pdb/mom_2015_3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EEP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=4EEP FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FMN:FLAVIN+MONONUCLEOTIDE'>FMN</scene></td></tr>
-{{STRUCTURE_4eep|  PDB=4eep  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=4eep FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4eep OCA], [https://pdbe.org/4eep PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=4eep RCSB], [https://www.ebi.ac.uk/pdbsum/4eep PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=4eep ProSAT]</span></td></tr>
+</table>
-===Crystal structure of LOV2 domain of Arabidopsis thaliana phototropin 2===
+== Function ==
+[https://www.uniprot.org/uniprot/PHOT2_ARATH PHOT2_ARATH] Protein kinase that acts as a blue light photoreceptor in a signal-transduction pathway for photo-induced movements. Mediates calcium spiking of extra- and intracellular origins in response to blue light. Involved in hypocotyl phototropism. Contributes to the chloroplast accumulation in low blue light and mediates their translocation (avoidance response) at high fluence. Regulates stomata opening and photomorphogenesis response of leaf tissue. Not involved in hypocotyl elongation inhibition, anthocyanin accumulation or cotyledon opening.<ref>PMID:11371609</ref> <ref>PMID:11251116</ref> <ref>PMID:12821778</ref> <ref>PMID:15031408</ref> <ref>PMID:14982991</ref>
+== References ==
-<!--
+<references/>
-The line below this paragraph, {{ABSTRACT_PUBMED_22573334}}, adds the Publication Abstract to the page
+__TOC__
-(as it appears on PubMed at http://www.pubmed.gov), where 22573334 is the PubMed ID number.
+</StructureSection>
--->
-{{ABSTRACT_PUBMED_22573334}}
-==About this Structure==
-[[4eep]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4EEP OCA].
-==Reference==
-<ref group="xtra">PMID:022573334</ref><references group="xtra"/>
 [[Category: Arabidopsis thaliana]]
-[[Category: Non-specific serine/threonine protein kinase]]
+[[Category: Large Structures]]
-[[Category: Arvai, A S.]]
+[[Category: Phototropin]]
-[[Category: Christie, J M.]]
+[[Category: RCSB PDB Molecule of the Month]]
-[[Category: Getzoff, E D.]]
+[[Category: Arvai AS]]
-[[Category: Hartfield, K A.]]
+[[Category: Christie JM]]
-[[Category: Hitomi, K]]
+[[Category: Getzoff ED]]
-[[Category: Pratt, A J.]]
+[[Category: Hartfield KA]]
-[[Category: Tainer, J A.]]
+[[Category: Hitomi K]]
-[[Category: Blue light photoreceptor]]
+[[Category: Pratt AJ]]
-[[Category: Flavoprotein]]
+[[Category: Tainer JA]]
-[[Category: Lov]]
-[[Category: Signaling protein]]