2i54: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:2i54.png|left|200px]]
-<!--
+==Phosphomannomutase from Leishmania mexicana==
-The line below this paragraph, containing "STRUCTURE_2i54", creates the "Structure Box" on the page.
+<StructureSection load='2i54' size='340' side='right'caption='[[2i54]], [[Resolution|resolution]] 2.10&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2i54]] is a 3 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_mexicana Leishmania mexicana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I54 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I54 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.1&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CIT:CITRIC+ACID'>CIT</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr>
-{{STRUCTURE_2i54|  PDB=2i54  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i54 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i54 OCA], [https://pdbe.org/2i54 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i54 RCSB], [https://www.ebi.ac.uk/pdbsum/2i54 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i54 ProSAT]</span></td></tr>
+</table>
-===Phosphomannomutase from Leishmania mexicana===
+== Function ==
+[https://www.uniprot.org/uniprot/Q95ZD7_LEIME Q95ZD7_LEIME] Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.[RuleBase:RU361118]
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_16963079}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 16963079 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i5/2i54_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_16963079}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[2i54]] is a 3 chain structure of [[Phosphomannomutase]] with sequence from [http://en.wikipedia.org/wiki/Leishmania_mexicana Leishmania mexicana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I54 OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i54 ConSurf].
+<div style="clear:both"></div>
 ==See Also==
 *[[Phosphomannomutase|Phosphomannomutase]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:016963079</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Leishmania mexicana]]
-[[Category: Phosphomannomutase]]
+[[Category: Smith BJ]]
-[[Category: Smith, B J.]]
-[[Category: Had domain]]
-[[Category: Isomerase]]