1xtp: Difference between revisions

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-[[Image:1xtp.png|left|200px]]
-<!--
+==Structural Analysis of Leishmania major LMAJ004091AAA, a SAM-dependent methyltransferase of the DUF858/Pfam05891 family==
-The line below this paragraph, containing "STRUCTURE_1xtp", creates the "Structure Box" on the page.
+<StructureSection load='1xtp' size='340' side='right'caption='[[1xtp]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1xtp]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Leishmania_major_strain_Friedlin Leishmania major strain Friedlin]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XTP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1XTP FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene>, <scene name='pdbligand=SAI:S-ADENOSYL-L-HOMOSELENOCYSTEINE'>SAI</scene></td></tr>
-{{STRUCTURE_1xtp|  PDB=1xtp  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1xtp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1xtp OCA], [https://pdbe.org/1xtp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1xtp RCSB], [https://www.ebi.ac.uk/pdbsum/1xtp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1xtp ProSAT]</span></td></tr>
+</table>
-===Structural Analysis of Leishmania major LMAJ004091AAA, a SAM-dependent methyltransferase of the DUF858/Pfam05891 family===
+== Function ==
+[https://www.uniprot.org/uniprot/Q4Q7M2_LEIMA Q4Q7M2_LEIMA]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-[[1xtp]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1XTP OCA].
+Check<jmol>
-[[Category: Leishmania major]]
+  <jmolCheckbox>
-[[Category: Hol, W G.J.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/xt/1xtp_consurf.spt"</scriptWhenChecked>
-[[Category: Robien, M A.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: SGPP, Structural Genomics of Pathogenic Protozoa Consortium.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Protein structure initiative]]
+  </jmolCheckbox>
-[[Category: Psi]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1xtp ConSurf].
-[[Category: Sam-dependent methyltransferase]]
+<div style="clear:both"></div>
-[[Category: Sgpp]]
+__TOC__
-[[Category: Structural genomic]]
+</StructureSection>
-[[Category: Structural genomics of pathogenic protozoa consortium]]
+[[Category: Large Structures]]
-[[Category: Transferase]]
+[[Category: Leishmania major strain Friedlin]]
+[[Category: Hol WGJ]]
+[[Category: Robien MA]]