2ro5: Difference between revisions

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-[[Image:2ro5.png|left|200px]]
-<!--
+==RDC-refined solution structure of the N-terminal DNA recognition domain of the Bacillus subtilis transition-state regulator SpoVT==
-The line below this paragraph, containing "STRUCTURE_2ro5", creates the "Structure Box" on the page.
+<StructureSection load='2ro5' size='340' side='right'caption='[[2ro5]]' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2ro5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RO5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2RO5 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
--->
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ro5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ro5 OCA], [https://pdbe.org/2ro5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ro5 RCSB], [https://www.ebi.ac.uk/pdbsum/2ro5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ro5 ProSAT]</span></td></tr>
-{{STRUCTURE_2ro5|  PDB=2ro5  |  SCENE=  }}
+</table>
+== Function ==
-===RDC-refined solution structure of the N-terminal DNA recognition domain of the Bacillus subtilis transition-state regulator SpoVT===
+[https://www.uniprot.org/uniprot/SPOVT_BACSU SPOVT_BACSU] Transcriptional factor that regulates positively or negatively the expression of a large number of forespore-specific sigma G-dependent genes. May provide a mechanism of feedback control that is important for forespore development (PubMed:8755877). SpoVT levels during spore formation have a major impact on the germination and the resistance of the resultant spores (PubMed:22522895).<ref>PMID:22522895</ref> <ref>PMID:8755877</ref>
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
-<!--
+Check<jmol>
-The line below this paragraph, {{ABSTRACT_PUBMED_19000822}}, adds the Publication Abstract to the page
+  <jmolCheckbox>
-(as it appears on PubMed at http://www.pubmed.gov), where 19000822 is the PubMed ID number.
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ro/2ro5_consurf.spt"</scriptWhenChecked>
--->
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-{{ABSTRACT_PUBMED_19000822}}
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-==About this Structure==
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ro5 ConSurf].
-[[2ro5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Bacillus_subtilis Bacillus subtilis]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2RO5 OCA].
+<div style="clear:both"></div>
+== References ==
-==Reference==
+<references/>
-<ref group="xtra">PMID:019000822</ref><references group="xtra"/>
+__TOC__
+</StructureSection>
 [[Category: Bacillus subtilis]]
-[[Category: Bobay, B G.]]
+[[Category: Large Structures]]
-[[Category: Cavanagh, J.]]
+[[Category: Bobay BG]]
-[[Category: Kojetin, D J.]]
+[[Category: Cavanagh J]]
-[[Category: Rance, M.]]
+[[Category: Kojetin DJ]]
-[[Category: Strauch, M A.]]
+[[Category: Rance M]]
-[[Category: Sullivan, D M.]]
+[[Category: Strauch MA]]
-[[Category: Thompson, R J.]]
+[[Category: Sullivan DM]]
-[[Category: Activator]]
+[[Category: Thompson RJ]]
-[[Category: Dna-binding]]
-[[Category: Repressor]]
-[[Category: Sporulation]]
-[[Category: Transcription]]
-[[Category: Transcription regulation]]