2kkv: Difference between revisions

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[[Image:2kkv.png|left|200px]]


<!--
==Solution NMR structure of an integrase domain from protein SPA4288 from Salmonella enterica, Northeast Structural Genomics Consortium Target SlR105H==
The line below this paragraph, containing "STRUCTURE_2kkv", creates the "Structure Box" on the page.
<StructureSection load='2kkv' size='340' side='right'caption='[[2kkv]]' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[2kkv]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_Paratyphi_A Salmonella enterica subsp. enterica serovar Paratyphi A]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKV OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2KKV FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">Solution NMR</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2kkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2kkv OCA], [https://pdbe.org/2kkv PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2kkv RCSB], [https://www.ebi.ac.uk/pdbsum/2kkv PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2kkv ProSAT], [https://www.topsan.org/Proteins/NESGC/2kkv TOPSAN]</span></td></tr>
{{STRUCTURE_2kkv|  PDB=2kkv  |  SCENE=  }}
</table>
 
== Function ==
===Solution NMR structure of an integrase domain from protein SPA4288 from Salmonella enterica, Northeast Structural Genomics Consortium Target SlR105H===
[https://www.uniprot.org/uniprot/A0A0H2WUU6_SALPA A0A0H2WUU6_SALPA]
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
==About this Structure==
Check<jmol>
[[2kkv]] is a 1 chain structure of [[Phage integrase]] with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_paratyphi_a Salmonella enterica subsp. enterica serovar paratyphi a]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2KKV OCA].  
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kk/2kkv_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2kkv ConSurf].
<div style="clear:both"></div>


==See Also==
==See Also==
*[[Phage integrase]]
*[[Retroviral integrase 3D structures|Retroviral integrase 3D structures]]
[[Category: Salmonella enterica subsp. enterica serovar paratyphi a]]
__TOC__
[[Category: Acton, T B.]]
</StructureSection>
[[Category: Belote, R L.]]
[[Category: Large Structures]]
[[Category: Ciccosanti, C.]]
[[Category: Salmonella enterica subsp. enterica serovar Paratyphi A]]
[[Category: Everett, J K.]]
[[Category: Acton TB]]
[[Category: Jiang, M.]]
[[Category: Belote RL]]
[[Category: Mills, J L.]]
[[Category: Ciccosanti C]]
[[Category: Montelione, G T.]]
[[Category: Everett JK]]
[[Category: NESG, Northeast Structural Genomics Consortium.]]
[[Category: Jiang M]]
[[Category: Nair, R.]]
[[Category: Mills JL]]
[[Category: Rost, B.]]
[[Category: Montelione GT]]
[[Category: Sukumaran, D K.]]
[[Category: Nair R]]
[[Category: Swapna, G V.T.]]
[[Category: Rost B]]
[[Category: Szyperski, T.]]
[[Category: Sukumaran DK]]
[[Category: Wu, Y.]]
[[Category: Swapna GVT]]
[[Category: Xiao, R.]]
[[Category: Szyperski T]]
[[Category: Dna binding protein]]
[[Category: Wu Y]]
[[Category: Nesgc]]
[[Category: Xiao R]]
[[Category: Northeast structural genomics consortium]]
[[Category: Protein structure]]
[[Category: Protein structure initiative]]
[[Category: Psi]]
[[Category: Structural genomic]]

Latest revision as of 09:46, 1 May 2024

Solution NMR structure of an integrase domain from protein SPA4288 from Salmonella enterica, Northeast Structural Genomics Consortium Target SlR105HSolution NMR structure of an integrase domain from protein SPA4288 from Salmonella enterica, Northeast Structural Genomics Consortium Target SlR105H

Structural highlights

2kkv is a 1 chain structure with sequence from Salmonella enterica subsp. enterica serovar Paratyphi A. Full experimental information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:Solution NMR
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A0A0H2WUU6_SALPA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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