1q4r: Difference between revisions

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-[[Image:1q4r.jpg|left|200px]]<br /><applet load="1q4r" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="1q4r, resolution 1.90&Aring;" />
-'''Gene Product of At3g17210 from Arabidopsis Thaliana'''<br />
-==About this Structure==
+==Gene Product of At3g17210 from Arabidopsis Thaliana==
-Q4R is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Known structural/functional Site: <scene name='pdbsite=AC1:Mg+Binding+Site+For+Residue+A+901'>AC1</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q4R OCA].
+<StructureSection load='1q4r' size='340' side='right'caption='[[1q4r]], [[Resolution|resolution]] 1.90&Aring;' scene=''>
+== Structural highlights ==
-==Reference==
+<table><tr><td colspan='2'>[[1q4r]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Q4R OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Q4R FirstGlance]. <br>
-Crystal structure of the protein from gene At3g17210 of Arabidopsis thaliana., Bingman CA, Johnson KA, Peterson FC, Frederick RO, Zhao Q, Thao S, Fox BG, Volkman BF, Jeon WB, Smith DW, Newman CS, Ulrich EL, Hegeman A, Sussman MR, Markley JL, Phillips GN Jr, Proteins. 2004 Oct 1;57(1):218-20. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15326607 15326607]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.9&#8491;</td></tr>
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1q4r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1q4r OCA], [https://pdbe.org/1q4r PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1q4r RCSB], [https://www.ebi.ac.uk/pdbsum/1q4r PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1q4r ProSAT], [https://www.topsan.org/Proteins/CESG/1q4r TOPSAN]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/POP3_ARATH POP3_ARATH]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/q4/1q4r_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1q4r ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
 [[Category: Arabidopsis thaliana]]
-[[Category: Single protein]]
+[[Category: Large Structures]]
-[[Category: Bingman, C.A.]]
+[[Category: Bingman CA]]
-[[Category: CESG, Center.for.Eukaryotic.Structural.Genomics.]]
+[[Category: Johnson KA]]
-[[Category: Johnson, K.A.]]
+[[Category: Phillips Jr GN]]
-[[Category: Jr., G.N.Phillips.]]
+[[Category: Smith DW]]
-[[Category: Smith, D.W.]]
-[[Category: MG]]
-[[Category: arabidopsis thaliana]]
-[[Category: center for eukaryotic structural genomics]]
-[[Category: cesg]]
-[[Category: protein structure initiative]]
-[[Category: structural genomics]]
-[[Category: unknown function]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 13 08:16:02 2008''