3igs: Difference between revisions

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-[[Image:3igs.png|left|200px]]
-<!--
+==Structure of the Salmonella enterica N-acetylmannosamine-6-phosphate 2-epimerase==
-The line below this paragraph, containing "STRUCTURE_3igs", creates the "Structure Box" on the page.
+<StructureSection load='3igs' size='340' side='right'caption='[[3igs]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3igs]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/"bacillus_typhimurium"_loeffler_1892 "bacillus typhimurium" loeffler 1892]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IGS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3IGS FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=16G:N-ACETYL-D-GLUCOSAMINE-6-PHOSPHATE'>16G</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
--->
+<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_3igs|  PDB=3igs  |  SCENE=  }}
+<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">nanE2, STM3337 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=90371 "Bacillus typhimurium" Loeffler 1892])</td></tr>
+<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[https://en.wikipedia.org/wiki/N-acylglucosamine-6-phosphate_2-epimerase N-acylglucosamine-6-phosphate 2-epimerase], with EC number [https://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.1.3.9 5.1.3.9] </span></td></tr>
-===Structure of the Salmonella enterica N-acetylmannosamine-6-phosphate 2-epimerase===
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3igs FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3igs OCA], [https://pdbe.org/3igs PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3igs RCSB], [https://www.ebi.ac.uk/pdbsum/3igs PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3igs ProSAT], [https://www.topsan.org/Proteins/CSGID/3igs TOPSAN]</span></td></tr>
+</table>
+== Function ==
-==About this Structure==
+[[https://www.uniprot.org/uniprot/NANE2_SALTY NANE2_SALTY]] Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N-acetylglucosamine-6-phosphate (GlcNAc-6-P) (Potential).
-[[3igs]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Salmonella_enterica_subsp._enterica_serovar_typhimurium Salmonella enterica subsp. enterica serovar typhimurium]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3IGS OCA].
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ig/3igs_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3igs ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Bacillus typhimurium loeffler 1892]]
+[[Category: Large Structures]]
 [[Category: N-acylglucosamine-6-phosphate 2-epimerase]]
-[[Category: Salmonella enterica subsp. enterica serovar typhimurium]]
+[[Category: Anderson, S M]]
-[[Category: Anderson, S M.]]
+[[Category: Anderson, W F]]
-[[Category: Anderson, W F.]]
+[[Category: Structural genomic]]
-[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+[[Category: Gordon, E]]
-[[Category: Gordon, E.]]
+[[Category: Papazisi, L]]
-[[Category: Papazisi, L.]]
+[[Category: Savchenko, A]]
-[[Category: Savchenko, A.]]
+[[Category: Skarina, T]]
-[[Category: Skarina, T.]]
+[[Category: Wawrzak, Z]]
-[[Category: Wawrzak, Z.]]
 [[Category: Carbohydrate metabolism]]
-[[Category: Center for structural genomics of infectious disease]]
 [[Category: Csgid]]
 [[Category: Energy metabolism]]
 [[Category: Isomerase]]
 [[Category: Salmonella]]
-[[Category: Structural genomic]]
 [[Category: Sugar]]