2pd0: Difference between revisions

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New page: left|200px<br /><applet load="2pd0" size="350" color="white" frame="true" align="right" spinBox="true" caption="2pd0, resolution 2.30Å" /> '''Protein cgd2_2020 fr...
 
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[[Image:2pd0.gif|left|200px]]<br /><applet load="2pd0" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2pd0, resolution 2.30&Aring;" />
'''Protein cgd2_2020 from Cryptosporidium parvum'''<br />


==About this Structure==
==Protein cgd2_2020 from Cryptosporidium parvum==
2PD0 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Cryptosporidium_parvum Cryptosporidium parvum] with <scene name='pdbligand=MES:'>MES</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PD0 OCA].  
<StructureSection load='2pd0' size='340' side='right'caption='[[2pd0]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
[[Category: Cryptosporidium parvum]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2pd0]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Crypv Crypv]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2PD0 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2PD0 FirstGlance]. <br>
[[Category: Arrowsmith, C.]]
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene></td></tr>
[[Category: Artz, J.]]
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Bochkarev, A.]]
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">XP_626409 ([https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5807 CRYPV])</td></tr>
[[Category: Chruszcz, M.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2pd0 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2pd0 OCA], [https://pdbe.org/2pd0 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2pd0 RCSB], [https://www.ebi.ac.uk/pdbsum/2pd0 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2pd0 ProSAT]</span></td></tr>
[[Category: Cymborowski, M.]]
</table>
[[Category: Edwards, A.]]
== Evolutionary Conservation ==
[[Category: Hills, T.]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: Hui, R.]]
Check<jmol>
[[Category: Lew, J.]]
  <jmolCheckbox>
[[Category: Melone, M.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/pd/2pd0_consurf.spt"</scriptWhenChecked>
[[Category: Minor, W.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: SGC, Structural.Genomics.Consortium.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Sundstrom, M.]]
  </jmolCheckbox>
[[Category: Weigelt, J.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2pd0 ConSurf].
[[Category: Wernimont, A.]]
<div style="clear:both"></div>
[[Category: Zhao, Y.]]
__TOC__
[[Category: MES]]
</StructureSection>
[[Category: sgc]]
[[Category: Crypv]]
[[Category: structural genomics]]
[[Category: Large Structures]]
[[Category: structural genomics consortium]]
[[Category: Arrowsmith, C]]
 
[[Category: Artz, J]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:22:27 2008''
[[Category: Bochkarev, A]]
[[Category: Chruszcz, M]]
[[Category: Cymborowski, M]]
[[Category: Edwards, A]]
[[Category: Hills, T]]
[[Category: Hui, R]]
[[Category: Lew, J]]
[[Category: Melone, M]]
[[Category: Minor, W]]
[[Category: Structural genomic]]
[[Category: Sundstrom, M]]
[[Category: Weigelt, J]]
[[Category: Wernimont, A]]
[[Category: Zhao, Y]]
[[Category: Sgc]]
[[Category: Unknown function]]

Latest revision as of 18:21, 17 June 2021

Protein cgd2_2020 from Cryptosporidium parvumProtein cgd2_2020 from Cryptosporidium parvum

Structural highlights

2pd0 is a 4 chain structure with sequence from Crypv. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Ligands:
NonStd Res:
Gene:XP_626409 (CRYPV)
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2pd0, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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