2obb: Difference between revisions

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New page: left|200px<br /><applet load="2obb" size="350" color="white" frame="true" align="right" spinBox="true" caption="2obb, resolution 2.20Å" /> '''Structure of the con...
 
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[[Image:2obb.gif|left|200px]]<br /><applet load="2obb" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2obb, resolution 2.20&Aring;" />
'''Structure of the conserved protein coded by locus BT_0820 from Bacteroides thetaiotaomicron'''<br />


==About this Structure==
==Structure of the conserved protein coded by locus BT_0820 from Bacteroides thetaiotaomicron==
2OBB is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron Bacteroides thetaiotaomicron] with <scene name='pdbligand=MG:'>MG</scene> as [http://en.wikipedia.org/wiki/ligand ligand]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OBB OCA].  
<StructureSection load='2obb' size='340' side='right'caption='[[2obb]], [[Resolution|resolution]] 2.20&Aring;' scene=''>
[[Category: Bacteroides thetaiotaomicron]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2obb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacteroides_thetaiotaomicron_VPI-5482 Bacteroides thetaiotaomicron VPI-5482]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OBB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OBB FirstGlance]. <br>
[[Category: Abdullah, J.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.2&#8491;</td></tr>
[[Category: Bigelow, L.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Cuff, M.E.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2obb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2obb OCA], [https://pdbe.org/2obb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2obb RCSB], [https://www.ebi.ac.uk/pdbsum/2obb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2obb ProSAT], [https://www.topsan.org/Proteins/MCSG/2obb TOPSAN]</span></td></tr>
[[Category: Joachimiak, A.]]
</table>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
== Function ==
[[Category: MG]]
[https://www.uniprot.org/uniprot/Q8A9J5_BACTN Q8A9J5_BACTN]  
[[Category: bacteroides thetaiotaomicron]]
== Evolutionary Conservation ==
[[Category: mcsg]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: midwest center for structural genomics]]
Check<jmol>
[[Category: protein structure initiative]]
  <jmolCheckbox>
[[Category: psi-2]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ob/2obb_consurf.spt"</scriptWhenChecked>
[[Category: structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
 
    <text>to colour the structure by Evolutionary Conservation</text>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 21:08:23 2008''
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2obb ConSurf].
<div style="clear:both"></div>
__TOC__
</StructureSection>
[[Category: Bacteroides thetaiotaomicron VPI-5482]]
[[Category: Large Structures]]
[[Category: Abdullah J]]
[[Category: Bigelow L]]
[[Category: Cuff ME]]
[[Category: Joachimiak A]]

Latest revision as of 12:23, 6 November 2024

Structure of the conserved protein coded by locus BT_0820 from Bacteroides thetaiotaomicronStructure of the conserved protein coded by locus BT_0820 from Bacteroides thetaiotaomicron

Structural highlights

2obb is a 1 chain structure with sequence from Bacteroides thetaiotaomicron VPI-5482. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.2Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

Q8A9J5_BACTN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2obb, resolution 2.20Å

Drag the structure with the mouse to rotate

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OCA