2i3d: Difference between revisions

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New page: left|200px<br /><applet load="2i3d" size="350" color="white" frame="true" align="right" spinBox="true" caption="2i3d, resolution 1.50Å" /> '''Crystal Structure of...
 
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[[Image:2i3d.gif|left|200px]]<br /><applet load="2i3d" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2i3d, resolution 1.50&Aring;" />
'''Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens'''<br />


==About this Structure==
==Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens==
2I3D is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens] with <scene name='pdbligand=MG:'>MG</scene> and <scene name='pdbligand=CL:'>CL</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3D OCA].  
<StructureSection load='2i3d' size='340' side='right'caption='[[2i3d]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
[[Category: Agrobacterium tumefaciens]]
== Structural highlights ==
[[Category: Single protein]]
<table><tr><td colspan='2'>[[2i3d]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2I3D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2I3D FirstGlance]. <br>
[[Category: Edwards, A.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
[[Category: Joachimiak, A.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2i3d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2i3d OCA], [https://pdbe.org/2i3d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2i3d RCSB], [https://www.ebi.ac.uk/pdbsum/2i3d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2i3d ProSAT], [https://www.topsan.org/Proteins/MCSG/2i3d TOPSAN]</span></td></tr>
[[Category: Osipiuk, J.]]
</table>
[[Category: Savchenko, A.]]
== Function ==
[[Category: Xu, X.]]
[https://www.uniprot.org/uniprot/A9CIK7_AGRFC A9CIK7_AGRFC]  
[[Category: Zheng, H.]]
== Evolutionary Conservation ==
[[Category: CL]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: MG]]
Check<jmol>
[[Category: apc5865]]
  <jmolCheckbox>
[[Category: hydrolase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/i3/2i3d_consurf.spt"</scriptWhenChecked>
[[Category: mcsg]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: midwest center for structural genomics]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: protein structure initiative]]
  </jmolCheckbox>
[[Category: psi-2]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2i3d ConSurf].
[[Category: structural genomics]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:34:04 2008''
</StructureSection>
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Edwards A]]
[[Category: Joachimiak A]]
[[Category: Osipiuk J]]
[[Category: Savchenko A]]
[[Category: Xu X]]
[[Category: Zheng H]]

Latest revision as of 11:10, 30 October 2024

Crystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciensCrystal Structure of Protein of Unknown Function ATU1826, a Putative Alpha/Beta Hydrolase from Agrobacterium tumefaciens

Structural highlights

2i3d is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Function

A9CIK7_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2i3d, resolution 1.50Å

Drag the structure with the mouse to rotate

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OCA
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