2gs8: Difference between revisions

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New page: left|200px<br /><applet load="2gs8" size="350" color="white" frame="true" align="right" spinBox="true" caption="2gs8, resolution 1.50Å" /> '''Structure of mevalon...
 
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[[Image:2gs8.gif|left|200px]]<br /><applet load="2gs8" size="350" color="white" frame="true" align="right" spinBox="true"
caption="2gs8, resolution 1.50&Aring;" />
'''Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes'''<br />


==About this Structure==
==Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes==
2GS8 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Streptococcus_pyogenes_m1_gas Streptococcus pyogenes m1 gas] with <scene name='pdbligand=EDO:'>EDO</scene> and <scene name='pdbligand=ACY:'>ACY</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS8 OCA].
<StructureSection load='2gs8' size='340' side='right'caption='[[2gs8]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
[[Category: Single protein]]
== Structural highlights ==
[[Category: Streptococcus pyogenes m1 gas]]
<table><tr><td colspan='2'>[[2gs8]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Streptococcus_pyogenes_M1_GAS Streptococcus pyogenes M1 GAS]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GS8 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2GS8 FirstGlance]. <br>
[[Category: Clancy, S.]]
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.5&#8491;</td></tr>
[[Category: Cuff, M.E.]]
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
[[Category: Joachimiak, A.]]
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2gs8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2gs8 OCA], [https://pdbe.org/2gs8 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2gs8 RCSB], [https://www.ebi.ac.uk/pdbsum/2gs8 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2gs8 ProSAT], [https://www.topsan.org/Proteins/MCSG/2gs8 TOPSAN]</span></td></tr>
[[Category: Li, H.]]
</table>
[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
== Evolutionary Conservation ==
[[Category: ACY]]
[[Image:Consurf_key_small.gif|200px|right]]
[[Category: EDO]]
Check<jmol>
[[Category: mcsg]]
  <jmolCheckbox>
[[Category: mevalonate pyrophosphate decarboxylase]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/gs/2gs8_consurf.spt"</scriptWhenChecked>
[[Category: midwest center for structural genomics]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: protein structure initiative]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: psi]]
  </jmolCheckbox>
[[Category: streptococcus pyogenes]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2gs8 ConSurf].
[[Category: structural genomics]]
<div style="clear:both"></div>
 
__TOC__
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Tue Jan 29 20:06:49 2008''
</StructureSection>
[[Category: Large Structures]]
[[Category: Streptococcus pyogenes M1 GAS]]
[[Category: Clancy S]]
[[Category: Cuff ME]]
[[Category: Joachimiak A]]
[[Category: Li H]]

Latest revision as of 03:59, 21 November 2024

Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenesStructure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes

Structural highlights

2gs8 is a 1 chain structure with sequence from Streptococcus pyogenes M1 GAS. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT, TOPSAN

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

2gs8, resolution 1.50Å

Drag the structure with the mouse to rotate

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