3nfm: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3nfm.png|left|200px]]


<!--
==Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution==
The line below this paragraph, containing "STRUCTURE_3nfm", creates the "Structure Box" on the page.
<StructureSection load='3nfm' size='340' side='right'caption='[[3nfm]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3nfm]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3NFM FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=FRU:FRUCTOSE'>FRU</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene></td></tr>
{{STRUCTURE_3nfm|  PDB=3nfm |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3nfm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nfm OCA], [https://pdbe.org/3nfm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3nfm RCSB], [https://www.ebi.ac.uk/pdbsum/3nfm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3nfm ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/D9J2T9_MOMBA D9J2T9_MOMBA]
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nf/3nfm_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3nfm ConSurf].
<div style="clear:both"></div>


===Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution===
==See Also==
 
*[[Ribosome inactivating protein 3D structures|Ribosome inactivating protein 3D structures]]
 
__TOC__
==About this Structure==
</StructureSection>
[[3nfm]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Momordica_balsamina Momordica balsamina]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NFM OCA].
[[Category: Large Structures]]
[[Category: Momordica balsamina]]
[[Category: Momordica balsamina]]
[[Category: RRNA N-glycosylase]]
[[Category: Kaur P]]
[[Category: Kaur, P.]]
[[Category: Kushwaha GS]]
[[Category: Kushwaha, G S.]]
[[Category: Pandey N]]
[[Category: Pandey, N.]]
[[Category: Sharma S]]
[[Category: Sharma, S.]]
[[Category: Singh TP]]
[[Category: Singh, T P.]]
[[Category: Sinha M]]
[[Category: Sinha, M.]]
[[Category: Fructose]]
[[Category: Hydrolase]]
[[Category: Plant protein]]
[[Category: Rip]]
[[Category: Rna n-glycosidase]]

Latest revision as of 13:13, 6 November 2024

Crystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolutionCrystal Structure of the complex of type I ribosome inactivating protein with fructose at 2.5A resolution

Structural highlights

3nfm is a 1 chain structure with sequence from Momordica balsamina. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.5Å
Ligands:, ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

D9J2T9_MOMBA

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3nfm, resolution 2.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA