Shank protein: Difference between revisions
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<StructureSection load=' | <StructureSection load='' size='350' side='right' caption='Structure of rat Shank1 protein PDZ domain trimer complex with guanine nucleotide exchange factor 7 C terminal (yellow), [[3l4f]]' scene='Shank_Family_Proteins/Opening/1'> | ||
[[Image:Shank Schematic.png|150px|left]] | __TOC__ | ||
[[Image:Shank Schematic.png|150px|left]] '''Shank (SH3 and multiple ankyrin repeat domains protein) Family Proteins''' are scaffolding proteins found in the postsynaptic density (PSD) of excitatory synapses. The PSD, a structure within the postsynaptic membrane of dendritic spines, contains a complex assembly of proteins which organize neurotransmitter receptors and regulatory elements.<ref name="Park">PMID:12626503</ref> The PSD coordinates communication of incoming signals to various targets and changes its composition in response to neural signals to aid neuronal plasticity<ref name="Baron">PMID:16439662</ref> Shank proteins function as the master organizer of the PSD with their ability to recruit and form multimeric complexes with postsynaptic receptors, signaling molecules, and cytoskeletal proteins, like AMPA, [[Neuroligin-Neurexin Interaction|Neuroligin]] and NMDA [[Glutamate Receptors|glutamate receptors]].<ref name="Durand">PMID:17173049</ref> Within the PSD, there are over 300 individual shank molecules, roughly 5% of the total protein molecules within the PSD.<ref name="Bozdagi">PMID: 21167025</ref> Shanks contain five domains for protein-protein interactions, including an ankyrin repeat domain, used to bind acting regulating proteins, an Src homology 3 (Sh3) domain, used to bind AMPA receptors, a PDZ domain, used to bind G protein coupled receptors, several proline-rich domains, and a C-terminal SAM domain, which is responsible for mediating Shank multimerization. (See Image)<ref name="Park"/> Shank also mediates the maturation of dendritic spines in neurons.<ref name="Durand"/> See also [[Neurodevelopmental Disorders]]. | |||
*'''SHANK1''' mutations were detected in individuals with autism spectrum disorders<ref>PMID:26335738</ref>. | |||
*'''SHANK2''' is located at the postsynaptic membrane of glutamatergic neurons<ref>PMID:32987185</ref>. | |||
*'''SHANK3''' is enriched at the postsynaptic density of excitatory synapses<ref>PMID:22749736</ref>. | |||
====Chromosome 22q13 Deletion Syndrome==== | ====Chromosome 22q13 Deletion Syndrome==== | ||
Chromosome 22q13 deletion syndrome (22q13DS) is a neurobehavioral syndrome marked by | Chromosome 22q13 deletion syndrome (22q13DS) is a neurobehavioral syndrome marked by global developmental delay, and [[Neurodevelopmental Disorders|autism spectrum disorder (ASD)]] features.<ref name="Durand"/> The Shank-3 gene is located within this region of chromosome 22. Studies have revealed that point mutations in Shank-3 can cause the neurodevelopmental symptoms associated with 22q13DS, accounting for 1% of all autism cases.<ref name="Garber">PMID: 17626859</ref> At the molecular level, disruption of the full length Shank-3 protein reduces AMPA receptor signaling and spine remodeling.<ref name="Bozdagi"/>Mice who were haploinsufficient for Shank-3, emitted fewer ultrasonic vocalizations during interactions with estrus female mice, a behavior reminiscent of that seen in Autism patients. Further, Shank knockout mice have less dendritic spine development, a diminished PSD size, decreased levels of proteins GKAP and Homer, and greatly impaired synaptic signaling. Interestingly, overexpression of Shank-3 may also result in an ASD, supporting the hypothesis that Autism is caused by improper Excitatory/Inhibitory neuronal ratios in the brain.<ref name="Bozdagi"/> Measurements of broad miRNA expression levels in Autism patients uncovered aberrant levels of miRNAs for genes involved in ASDs like [[MeCP2]], the cause of Rett Syndrome, [[Neurexin-Neuroligin Interaction|NRXN-1]], a gene implicated in ASDs, and Shank-3, adding support to Shank-3’s role in autism.<ref>PMID:18563458</ref> Due to the marked reduction in AMPA receptor signalling in Shank-3 mutants, compounds that enhance AMPA transmission (AMPAkinses) serve as potential [[Pharmaceutical Drugs|therapeutic approaches]] to treating some ASDs.<ref name="Bozdagi"/> | ||
====βPIX Structure==== | ====βPIX Structure==== | ||
βPIX | βPIX is a protein belonging to a group of guanine nucleotide exchange factors used by Rho GTPase family members, like Rac1 and Cdc42. Rac1 and Cdc42 regulate the actin cytoskeleton of synapses.<ref name="IM">PMID: 20117114</ref> PIX has an N-terminal Src homology 3 (SH3) domain which associates with PAK, a coiled-coil (CC) domain, which is critical for multimerization, and a C-terminal PDZ binding domain which interacts with the PDZ domain of Shank.<ref name="IM"/> The interaction of Shank with βPIX promotes the synaptic localization of βPIX and βPIX associated p21 Associated Kinase (PAK). Since PAK regulates actin cytoskeletons, and dendritic spines are actin-rich structures, it is believed that Shank recruits βPIX to dendritic spines to regulate the PSD.<ref name="Park"/> | ||
====Shank Family Protein Structure==== | ====Shank Family Protein Structure==== | ||
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====Shank Oligomerization==== | ====Shank Oligomerization==== | ||
Shank proteins are positioned between scaffolding proteins that are bound to either neurotransmitter receptors or the actin cytoskeleton. This puts Shank proteins in a perfect position to | Shank proteins are positioned between scaffolding proteins that are bound to either neurotransmitter receptors or the actin cytoskeleton. This puts Shank proteins in a perfect position to create the underlying structure of the PSD.<ref name="Baron"/> The <scene name='Shank_Family_Proteins/Multimer_opening_single/1'>SAM domain</scene> of Shank-3 can <scene name='Shank_Family_Proteins/Multimer_opening/2'>oligomerize</scene> (<scene name='Shank_Family_Proteins/Multimer_opening_alt/2'>Alternate View</scene>) to form large sheets composed of helical fibers stacked side by side. The proposed sheet structure with radially projecting protein interaction domains, is ideal architecture for a protein that must contact both membrane and cytoplasmic components at a synaptic surface.<ref name="Baron"/> It resembles the structure of a peg board, with Shank oligomers forming the board and PIX proteins forming the pegs to which things attach. Models of this sort validate the importance of Shank-3 as master scaffolding proteins and illustrate how slight mutations can disrupt an entire PSD and synaptic function. | ||
__NOTOC__ | |||
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==Page Development== | |||
This article was developed based on lectures given in Chemistry 543 by Prof. Clarence E. Schutt at Princeton University. | |||
==3D structures of Shank Family Proteins== | |||
Updated on {{REVISIONDAY2}}-{{MONTHNAME|{{REVISIONMONTH}}}}-{{REVISIONYEAR}} | |||
[[6cpi]] – hSHK1 SH3 domain – human - NMR<br /> | |||
[[ | [[1q3o]] – rSHK1 PDZ domain – rat<br /> | ||
[[ | [[1q3p]] – rSHK1 PDZ domain + guanylate kinase-associated protein peptide<br /> | ||
[[ | [[3l4f]] - rSHK1 PDZ domain + guanine nucleotide exchange factor 7 C terminal<br /> | ||
[[3qjm]], [[3qjn]] - rSHK1 PDZ domain + β-PIX<br /> | |||
[[3o5n]] - rSHK1 PDZ domain + inhibitor<br /> | |||
[[5o99]] – rSHK2 SH3 domain <br /> | |||
[[6cpj]] – rSHK2 SH3 domain - NMR<br /> | |||
[[2f3n]], [[2f44]] – rSHK3 SAM domain (mutant)<br /> | |||
[[5g4x]] – rSHK3 N-terminal<br /> | |||
[[5ova]] – rSHK3 PDZ domain <br /> | |||
[[5ovc]], [[5ovp]], [[5ovv]], [[6exj]] – rSHK3 PDZ domain + peptide<br /> | |||
[[5izu]] – SHK3 residues 533-655 + SAPAP3 peptide - mouse<br /> | |||
[[6kyk]] – mSHK3 NTD-ANK domain (mutant) + RAP1 <br /> | |||
[[6kyh]] – mSHK3 NTD-ANK domain (mutant) + HRas <br /> | |||
==References== | ==References== | ||
</StructureSection> | |||
<references/> | <references/> | ||
[[Category:Topic Page]] |