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[[Image:3af5.png|left|200px]]


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==The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii==
The line below this paragraph, containing "STRUCTURE_3af5", creates the "Structure Box" on the page.
<StructureSection load='3af5' size='340' side='right'caption='[[3af5]], [[Resolution|resolution]] 2.60&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3af5]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii_OT3 Pyrococcus horikoshii OT3]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AF5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3AF5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.6&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACY:ACETIC+ACID'>ACY</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
{{STRUCTURE_3af5|  PDB=3af5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3af5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3af5 OCA], [https://pdbe.org/3af5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3af5 RCSB], [https://www.ebi.ac.uk/pdbsum/3af5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3af5 ProSAT]</span></td></tr>
 
</table>
===The crystal structure of an archaeal CPSF subunit, PH1404 from Pyrococcus horikoshii===
== Function ==
 
[https://www.uniprot.org/uniprot/O50112_PYRHO O50112_PYRHO]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
[[3af5]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3AF5 OCA].  
Check<jmol>
 
  <jmolCheckbox>
==Reference==
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/af/3af5_consurf.spt"</scriptWhenChecked>
<ref group="xtra">PMID:20544974</ref><references group="xtra"/>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Pyrococcus horikoshii]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ishikawa, H.]]
  </jmolCheckbox>
[[Category: Kuramitsu, S.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3af5 ConSurf].
[[Category: Masui, R.]]
<div style="clear:both"></div>
[[Category: Nakagawa, N.]]
__TOC__
[[Category: Nishida, Y.]]
</StructureSection>
[[Category: Archaea]]
[[Category: Large Structures]]
[[Category: Archaeal cpsf]]
[[Category: Pyrococcus horikoshii OT3]]
[[Category: Beta-casp family]]
[[Category: Ishikawa H]]
[[Category: Hydrolase]]
[[Category: Kuramitsu S]]
[[Category: Kh domain]]
[[Category: Masui R]]
[[Category: Metallo-beta-lactamase superfamily]]
[[Category: Nakagawa N]]
[[Category: Pyrococcus horikoshii]]
[[Category: Nishida Y]]
[[Category: Ribonuclease]]

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