3kp7: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Image:3kp7.png|left|200px]]


<!--
==Staphylococcus epidermidis TcaR (apo form)==
The line below this paragraph, containing "STRUCTURE_3kp7", creates the "Structure Box" on the page.
<StructureSection load='3kp7' size='340' side='right'caption='[[3kp7]], [[Resolution|resolution]] 2.30&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3kp7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Staphylococcus_epidermidis_RP62A Staphylococcus epidermidis RP62A]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KP7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KP7 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.3&#8491;</td></tr>
-->
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kp7 OCA], [https://pdbe.org/3kp7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kp7 RCSB], [https://www.ebi.ac.uk/pdbsum/3kp7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kp7 ProSAT]</span></td></tr>
{{STRUCTURE_3kp7|  PDB=3kp7  |  SCENE=  }}
</table>
 
== Function ==
===Staphylococcus epidermidis TcaR (apo form)===
[https://www.uniprot.org/uniprot/Q5HLN6_STAEQ Q5HLN6_STAEQ]  
 
== Evolutionary Conservation ==
 
[[Image:Consurf_key_small.gif|200px|right]]
<!--
Check<jmol>
The line below this paragraph, {{ABSTRACT_PUBMED_20421503}}, adds the Publication Abstract to the page
  <jmolCheckbox>
(as it appears on PubMed at http://www.pubmed.gov), where 20421503 is the PubMed ID number.
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kp/3kp7_consurf.spt"</scriptWhenChecked>
-->
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
{{ABSTRACT_PUBMED_20421503}}
    <text>to colour the structure by Evolutionary Conservation</text>
 
  </jmolCheckbox>
==About this Structure==
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kp7 ConSurf].
[[3kp7]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_epidermidis_rp62a Staphylococcus epidermidis rp62a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KP7 OCA].  
<div style="clear:both"></div>
 
__TOC__
==Reference==
</StructureSection>
<ref group="xtra">PMID:20421503</ref><references group="xtra"/>
[[Category: Large Structures]]
[[Category: Staphylococcus epidermidis rp62a]]
[[Category: Staphylococcus epidermidis RP62A]]
[[Category: Chang, Y M.]]
[[Category: Chang YM]]
[[Category: Chen, C K.]]
[[Category: Chen CK]]
[[Category: Ko, T P.]]
[[Category: Ko TP]]
[[Category: Wang, A H.]]
[[Category: Wang AH]]
[[Category: Yeh, Y J.]]
[[Category: Yeh YJ]]
[[Category: Biofilm]]
[[Category: Dna binding]]
[[Category: Multiple drug resistance]]
[[Category: Transcription]]
[[Category: Transcription regulation]]
[[Category: Transcription regulator]]

Latest revision as of 11:30, 20 March 2024

Staphylococcus epidermidis TcaR (apo form)Staphylococcus epidermidis TcaR (apo form)

Structural highlights

3kp7 is a 2 chain structure with sequence from Staphylococcus epidermidis RP62A. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.3Å
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

Q5HLN6_STAEQ

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3kp7, resolution 2.30Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3kp7&oldid=4103880"