1sds: Difference between revisions

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OCA

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-[[Image:1sds.png|left|200px]]
-<!--
+==Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA==
-The line below this paragraph, containing "STRUCTURE_1sds", creates the "Structure Box" on the page.
+<StructureSection load='1sds' size='340' side='right'caption='[[1sds]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1sds]] is a 6 chain structure with sequence from [https://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDS OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1SDS FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=K:POTASSIUM+ION'>K</scene></td></tr>
-{{STRUCTURE_1sds|  PDB=1sds  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1sds FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1sds OCA], [https://pdbe.org/1sds PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1sds RCSB], [https://www.ebi.ac.uk/pdbsum/1sds PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1sds ProSAT]</span></td></tr>
+</table>
-===Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA===
+== Function ==
+[https://www.uniprot.org/uniprot/RL7A_METJA RL7A_METJA] Multifunctional RNA-binding protein that recognizes the K-turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_15130481}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 15130481 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/sd/1sds_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_15130481}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[1sds]] is a 6 chain structure of [[Ribosomal protein L7]] with sequence from [http://en.wikipedia.org/wiki/Methanocaldococcus_jannaschii Methanocaldococcus jannaschii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1SDS OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1sds ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Ribosomal protein L7]]
+*[[Ribosomal protein L7/L12|Ribosomal protein L7/L12]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:15130481</ref><references group="xtra"/>
+[[Category: Large Structures]]
 [[Category: Methanocaldococcus jannaschii]]
-[[Category: Amare, A Ferre-D.]]
+[[Category: Ferre-D'Amare A]]
-[[Category: Hamma, T.]]
+[[Category: Hamma T]]
-[[Category: Protein-rna complex]]
-[[Category: Protein/rna complex complex]]