1lnb: Difference between revisions

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-[[Image:1lnb.png|left|200px]]
-<!--
+==A STRUCTURAL ANALYSIS OF METAL SUBSTITUTIONS IN THERMOLYSIN==
-The line below this paragraph, containing "STRUCTURE_1lnb", creates the "Structure Box" on the page.
+<StructureSection load='1lnb' size='340' side='right'caption='[[1lnb]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[1lnb]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNB OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1LNB FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=DMS:DIMETHYL+SULFOXIDE'>DMS</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=LYS:LYSINE'>LYS</scene>, <scene name='pdbligand=VAL:VALINE'>VAL</scene></td></tr>
-{{STRUCTURE_1lnb|  PDB=1lnb  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1lnb FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1lnb OCA], [https://pdbe.org/1lnb PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1lnb RCSB], [https://www.ebi.ac.uk/pdbsum/1lnb PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1lnb ProSAT]</span></td></tr>
+</table>
-===A STRUCTURAL ANALYSIS OF METAL SUBSTITUTIONS IN THERMOLYSIN===
+== Function ==
+[https://www.uniprot.org/uniprot/THER_BACTH THER_BACTH] Extracellular zinc metalloprotease.
+== Evolutionary Conservation ==
-<!--
+[[Image:Consurf_key_small.gif|200px|right]]
-The line below this paragraph, {{ABSTRACT_PUBMED_8535232}}, adds the Publication Abstract to the page
+Check<jmol>
-(as it appears on PubMed at http://www.pubmed.gov), where 8535232 is the PubMed ID number.
+  <jmolCheckbox>
--->
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ln/1lnb_consurf.spt"</scriptWhenChecked>
-{{ABSTRACT_PUBMED_8535232}}
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
-==About this Structure==
+  </jmolCheckbox>
-[[1lnb]] is a 1 chain structure of [[Thermolysin]] with sequence from [http://en.wikipedia.org/wiki/Bacillus_thermoproteolyticus Bacillus thermoproteolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1LNB OCA].
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1lnb ConSurf].
+<div style="clear:both"></div>
 ==See Also==
-*[[Thermolysin]]
+*[[Thermolysin 3D structures|Thermolysin 3D structures]]
+__TOC__
-==Reference==
+</StructureSection>
-<ref group="xtra">PMID:8535232</ref><references group="xtra"/>
 [[Category: Bacillus thermoproteolyticus]]
-[[Category: Thermolysin]]
+[[Category: Large Structures]]
-[[Category: Hausrath, A C.]]
+[[Category: Hausrath AC]]
-[[Category: Holland, D R.]]
+[[Category: Holland DR]]
-[[Category: Juers, D.]]
+[[Category: Juers D]]
-[[Category: Matthews, B W.]]
+[[Category: Matthews BW]]