2ofn: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

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-[[Image:2ofn.jpg|left|200px]]<br /><applet load="2ofn" size="350" color="white" frame="true" align="right" spinBox="true"
-caption="2ofn" />
-'''Solution structure of FK506-binding domain (FKBD)of FKBP35 from Plasmodium falciparum'''<br />
-==About this Structure==
+==Solution structure of FK506-binding domain (FKBD)of FKBP35 from Plasmodium falciparum==
-OFN is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Plasmodium_falciparum Plasmodium falciparum]. Active as [http://en.wikipedia.org/wiki/Peptidylprolyl_isomerase Peptidylprolyl isomerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=5.2.1.8 5.2.1.8] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OFN OCA].
+<StructureSection load='2ofn' size='340' side='right'caption='[[2ofn]]' scene=''>
+== Structural highlights ==
-==Reference==
+<table><tr><td colspan='2'>[[2ofn]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Plasmodium_falciparum_3D7 Plasmodium falciparum 3D7]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OFN OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2OFN FirstGlance]. <br>
-Solution structure of FK506 binding domain (FKBD) of Plasmodium falciparum FK506 binding protein 35 (PfFKBP35)., Kang CB, Ye H, Yoon HR, Yoon HS, Proteins. 2008 Jan 1;70(1):300-2. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17876830 17876830]
+</td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2ofn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ofn OCA], [https://pdbe.org/2ofn PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2ofn RCSB], [https://www.ebi.ac.uk/pdbsum/2ofn PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2ofn ProSAT]</span></td></tr>
-[[Category: Peptidylprolyl isomerase]]
+</table>
-[[Category: Plasmodium falciparum]]
+== Function ==
-[[Category: Single protein]]
+[https://www.uniprot.org/uniprot/FKB35_PLAF7 FKB35_PLAF7] Has peptidylprolyl isomerase (PPIase) and co-chaperone activities (PubMed:15664653, PubMed:15850699). Assists protein folding by catalyzing the peptidyl conversion of cis and trans rotamers of the prolyl amide bond of protein substrates (PubMed:15664653, PubMed:15850699, PubMed:23974147). Inhibits calcineurin phosphatase activity in vitro (PubMed:15850699, PubMed:17289400, PubMed:23974147). Plays an essential role in merozoite egress from host erythrocytes (PubMed:15664653, PubMed:23974147).<ref>PMID:15664653</ref> <ref>PMID:15850699</ref> <ref>PMID:17289400</ref> <ref>PMID:23974147</ref>
-[[Category: Kang, C.B.]]
+== Evolutionary Conservation ==
-[[Category: Ye, H.]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: Yoon, H.R.]]
+Check<jmol>
-[[Category: Yoon, H.S.]]
+  <jmolCheckbox>
-[[Category: beta barrel]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/of/2ofn_consurf.spt"</scriptWhenChecked>
-[[Category: central helix]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: isomerase]]
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jan 23 11:26:29 2008''
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2ofn ConSurf].
+<div style="clear:both"></div>
+== References ==
+<references/>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
+[[Category: Plasmodium falciparum 3D7]]
+[[Category: Kang CB]]
+[[Category: Ye H]]
+[[Category: Yoon HR]]
+[[Category: Yoon HS]]