3lsm: Difference between revisions

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-{{Seed}}
-[[Image:3lsm.jpg|left|200px]]
-<!--
+==Pyranose 2-oxidase H167A mutant with flavin N(5) sulfite adduct==
-The line below this paragraph, containing "STRUCTURE_3lsm", creates the "Structure Box" on the page.
+<StructureSection load='3lsm' size='340' side='right'caption='[[3lsm]], [[Resolution|resolution]] 1.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3lsm]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Trametes_ochracea Trametes ochracea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LSM OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LSM FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=12P:DODECAETHYLENE+GLYCOL'>12P</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=SFD:(S)-10-((2S,3S,4R)-5-((S)-((S)-(((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHOXY)(HYDROXY)PHOSPHORYLOXY)(HYDROXY)PHOSPHORYLOXY)-2,3,4-TRIHYDROXYPENTYL)-7,8-DIMETHYL-2,4-DIOXO-2,3,4,4A-TETRAHYDROBENZO[G]PTERIDINE-5(10H)-SULFONIC+ACID'>SFD</scene>, <scene name='pdbligand=SO3:SULFITE+ION'>SO3</scene></td></tr>
-{{STRUCTURE_3lsm|  PDB=3lsm  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lsm FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lsm OCA], [https://pdbe.org/3lsm PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lsm RCSB], [https://www.ebi.ac.uk/pdbsum/3lsm PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lsm ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/Q7ZA32_TRAOC Q7ZA32_TRAOC]
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ls/3lsm_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lsm ConSurf].
+<div style="clear:both"></div>
-===Pyranose 2-oxidase H167A mutant with flavin N(5) sulfite adduct===
+==See Also==
+*[[Pyranose oxidase|Pyranose oxidase]]
+__TOC__
-==About this Structure==
+</StructureSection>
-LSM is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Trametes_ochracea Trametes ochracea]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LSM OCA].
+[[Category: Large Structures]]
-[[Category: Pyranose oxidase]]
 [[Category: Trametes ochracea]]
-[[Category: Divne, C.]]
+[[Category: Divne C]]
-[[Category: Spadiut, O.]]
+[[Category: Spadiut O]]
-[[Category: Tan, T C.]]
+[[Category: Tan TC]]
-[[Category: Covalently linked fad]]
-[[Category: Gmc oxidoreductase]]
-[[Category: H167a mutant]]
-[[Category: Homotetramer]]
-[[Category: Oxidoreductase]]
-[[Category: Phbh fold]]
-[[Category: Rossmann fold]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Aug 25 08:57:45 2010''

3lsm: Difference between revisions

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