3a5f: Difference between revisions

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{{Seed}}
[[Image:3a5f.jpg|left|200px]]


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==High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate==
The line below this paragraph, containing "STRUCTURE_3a5f", creates the "Structure Box" on the page.
<StructureSection load='3a5f' size='340' side='right'caption='[[3a5f]], [[Resolution|resolution]] 1.19&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)  
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3a5f]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Clostridium_botulinum_A_str._ATCC_19397 Clostridium botulinum A str. ATCC 19397]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A5F OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A5F FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.19&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=KPI:(2S)-2-AMINO-6-[(1-HYDROXY-1-OXO-PROPAN-2-YLIDENE)AMINO]HEXANOIC+ACID'>KPI</scene></td></tr>
{{STRUCTURE_3a5f| PDB=3a5f |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a5f FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a5f OCA], [https://pdbe.org/3a5f PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a5f RCSB], [https://www.ebi.ac.uk/pdbsum/3a5f PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a5f ProSAT]</span></td></tr>
</table>
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a5/3a5f_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a5f ConSurf].
<div style="clear:both"></div>


===High-resolution structure of DHDPS from Clostridium botulinum===
==See Also==
 
*[[Dihydrodipicolinate synthase|Dihydrodipicolinate synthase]]
 
__TOC__
==About this Structure==
</StructureSection>
3A5F is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Clostridium_botulinum_a Clostridium botulinum a]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A5F OCA].
[[Category: Clostridium botulinum A str. ATCC 19397]]
[[Category: Clostridium botulinum a]]
[[Category: Large Structures]]
[[Category: Dihydrodipicolinate synthase]]
[[Category: Atkinson SC]]
[[Category: Atkinson, S.]]
[[Category: Dobson RCJ]]
[[Category: Dobson, R C.J.]]
[[Category: Perugini MA]]
[[Category: Amino-acid biosynthesis]]
[[Category: Cytoplasm]]
[[Category: Diaminopimelate biosynthesis]]
[[Category: Enzyme]]
[[Category: Lyase]]
[[Category: Lysine biosynthesis]]
[[Category: Schiff base]]
[[Category: Tim barrel]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Jun 30 13:45:32 2010''

Latest revision as of 17:11, 1 November 2023

High-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvateHigh-resolution structure of DHDPS from Clostridium botulinum in complex with pyruvate

Structural highlights

3a5f is a 2 chain structure with sequence from Clostridium botulinum A str. ATCC 19397. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.19Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3a5f, resolution 1.19Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
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