3hf4: Difference between revisions

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-{{Seed}}
-[[Image:3hf4.jpg|left|200px]]
-<!--
+==Crystal structure of rat methemoglobin in R2 state==
-The line below this paragraph, containing "STRUCTURE_3hf4", creates the "Structure Box" on the page.
+<StructureSection load='3hf4' size='340' side='right'caption='[[3hf4]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3hf4]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HF4 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3HF4 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.7&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=HEM:PROTOPORPHYRIN+IX+CONTAINING+FE'>HEM</scene></td></tr>
-{{STRUCTURE_3hf4|  PDB=3hf4  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3hf4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3hf4 OCA], [https://pdbe.org/3hf4 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3hf4 RCSB], [https://www.ebi.ac.uk/pdbsum/3hf4 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3hf4 ProSAT]</span></td></tr>
+</table>
+== Function ==
+[https://www.uniprot.org/uniprot/HBA_RAT HBA_RAT] Involved in oxygen transport from the lung to the various peripheral tissues.
+== Evolutionary Conservation ==
+[[Image:Consurf_key_small.gif|200px|right]]
+Check<jmol>
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/hf/3hf4_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3hf4 ConSurf].
+<div style="clear:both"></div>
-===Crystal structure of rat methemoglobin in R2 state===
+==See Also==
+*[[Hemoglobin 3D structures|Hemoglobin 3D structures]]
+__TOC__
-==About this Structure==
+</StructureSection>
-HF4 is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Rattus_norvegicus Rattus norvegicus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3HF4 OCA].
+[[Category: Large Structures]]
-[[Category: Rattus norvegicus]]
-[[Category: Balasubramanian, M.]]
-[[Category: Moorthy, Pon Sathya.]]
-[[Category: Neelagandan, K.]]
-[[Category: Ponnuswamy, M N.]]
-[[Category: Heme]]
-[[Category: Hemoglobin]]
-[[Category: Iron]]
-[[Category: Metal-binding]]
-[[Category: Oxygen storage]]
-[[Category: Oxygen transport]]
-[[Category: Phosphoprotein]]
-[[Category: Polymorphism]]
-[[Category: Quaternary structure]]
 [[Category: Rattus norvegicus]]
-[[Category: Transport]]
+[[Category: Balasubramanian M]]
+[[Category: Neelagandan K]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu May 20 09:46:31 2010''
+[[Category: Ponnuswamy MN]]
+[[Category: Sathya Moorthy P]]