3a0o: Difference between revisions

From Proteopedia
Jump to navigation Jump to search
← Older edit
No edit summary
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{Seed}}
[[Image:3a0o.jpg|left|200px]]


<!--
==Crystal structure of alginate lyase from Agrobacterium tumefaciens C58==
The line below this paragraph, containing "STRUCTURE_3a0o", creates the "Structure Box" on the page.
<StructureSection load='3a0o' size='340' side='right'caption='[[3a0o]], [[Resolution|resolution]] 2.11&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3a0o]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A0O OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3A0O FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.11&#8491;</td></tr>
-->
<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_3a0o|  PDB=3a0o  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3a0o FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3a0o OCA], [https://pdbe.org/3a0o PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3a0o RCSB], [https://www.ebi.ac.uk/pdbsum/3a0o PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3a0o ProSAT]</span></td></tr>
 
</table>
===Crystal structure of alginate lyase from Agrobacterium tumefaciens C58===
== Function ==
 
[https://www.uniprot.org/uniprot/A9CEJ9_AGRFC A9CEJ9_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3A0O is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens Agrobacterium tumefaciens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3A0O OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens]]
  <jmolCheckbox>
[[Category: Hashimoto, W.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/a0/3a0o_consurf.spt"</scriptWhenChecked>
[[Category: Mikami, B.]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
[[Category: Murata, K.]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Ochiai, A.]]
  </jmolCheckbox>
[[Category: Yamasaki, M.]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3a0o ConSurf].
[[Category: Alpha/alpha ballel+anti-parallel beta sheet]]
<div style="clear:both"></div>
[[Category: Lyase]]
__TOC__
 
</StructureSection>
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 31 13:47:20 2010''
[[Category: Agrobacterium fabrum str. C58]]
[[Category: Large Structures]]
[[Category: Hashimoto W]]
[[Category: Mikami B]]
[[Category: Murata K]]
[[Category: Ochiai A]]
[[Category: Yamasaki M]]

Latest revision as of 16:59, 13 March 2024

Crystal structure of alginate lyase from Agrobacterium tumefaciens C58Crystal structure of alginate lyase from Agrobacterium tumefaciens C58

Structural highlights

3a0o is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.11Å
Ligands:
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A9CEJ9_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3a0o, resolution 2.11Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA
Retrieved from "https://proteopedia.openfox.io/wiki/index.php?title=3a0o&oldid=4089403"