3lxz: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-{{Seed}}
-[[Image:3lxz.jpg|left|200px]]
-<!--
+==Structure of probable Glutathione S-transferase(PP0183) from Pseudomonas putida==
-The line below this paragraph, containing "STRUCTURE_3lxz", creates the "Structure Box" on the page.
+<StructureSection load='3lxz' size='340' side='right'caption='[[3lxz]], [[Resolution|resolution]] 1.76&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3lxz]] is a 4 chain structure with sequence from [https://en.wikipedia.org/wiki/Pseudomonas_putida_KT2440 Pseudomonas putida KT2440]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LXZ OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3LXZ FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.76&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_3lxz|  PDB=3lxz  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3lxz FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lxz OCA], [https://pdbe.org/3lxz PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3lxz RCSB], [https://www.ebi.ac.uk/pdbsum/3lxz PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3lxz ProSAT]</span></td></tr>
+</table>
-===Structure of probable Glutathione S-transferase(PP0183) from Pseudomonas putida===
+== Function ==
+[https://www.uniprot.org/uniprot/Q88RE7_PSEPK Q88RE7_PSEPK]
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-LXZ is a 4 chains structure with sequences from [http://en.wikipedia.org/wiki/Pseudomonas_putida Pseudomonas putida]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LXZ OCA].
+Check<jmol>
-[[Category: Pseudomonas putida]]
+  <jmolCheckbox>
-[[Category: Almo, S C.]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lx/3lxz_consurf.spt"</scriptWhenChecked>
-[[Category: Burley, S K.]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
-[[Category: NYSGXRC, New York SGX Research Center for Structural Genomics.]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: Ramagopal, U A.]]
+  </jmolCheckbox>
-[[Category: Toro, R.]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3lxz ConSurf].
-[[Category: Glutathione s-transferase]]
+<div style="clear:both"></div>
-[[Category: New york sgx research center for structural genomic]]
+__TOC__
-[[Category: Nysgxrc]]
+</StructureSection>
-[[Category: Pp0183]]
+[[Category: Large Structures]]
-[[Category: Protein structure initiative]]
+[[Category: Pseudomonas putida KT2440]]
-[[Category: Psi-2]]
+[[Category: Almo SC]]
-[[Category: Structural genomic]]
+[[Category: Burley SK]]
-[[Category: Transferase]]
+[[Category: Ramagopal UA]]
+[[Category: Toro R]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Mar 10 14:57:00 2010''