3kcp: Difference between revisions

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[[Image:3kcp.jpg|left|200px]]


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==Crystal structure of interacting Clostridium thermocellum multimodular components==
The line below this paragraph, containing "STRUCTURE_3kcp", creates the "Structure Box" on the page.
<StructureSection load='3kcp' size='340' side='right'caption='[[3kcp]], [[Resolution|resolution]] 1.94&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3kcp]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Acetivibrio_thermocellus_ATCC_27405 Acetivibrio thermocellus ATCC 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KCP OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KCP FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.94&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
{{STRUCTURE_3kcp| PDB=3kcp |  SCENE= }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3kcp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kcp OCA], [https://pdbe.org/3kcp PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3kcp RCSB], [https://www.ebi.ac.uk/pdbsum/3kcp PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3kcp ProSAT]</span></td></tr>
</table>
== Function ==
[https://www.uniprot.org/uniprot/CIPA_ACET2 CIPA_ACET2] Acts as a scaffolding protein in the cellulosome. It promotes binding of cellulose to the catalytic domains of the cellulolytic enzymes.
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
Check<jmol>
  <jmolCheckbox>
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kc/3kcp_consurf.spt"</scriptWhenChecked>
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
    <text>to colour the structure by Evolutionary Conservation</text>
  </jmolCheckbox>
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3kcp ConSurf].
<div style="clear:both"></div>


===Crystal structure of interacting Clostridium thermocellum multimodular components===
==See Also==
 
*[[Cellulosome scaffolding protein 3D structures|Cellulosome scaffolding protein 3D structures]]
 
__TOC__
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</StructureSection>
The line below this paragraph, {{ABSTRACT_PUBMED_20070943}}, adds the Publication Abstract to the page
[[Category: Acetivibrio thermocellus ATCC 27405]]
(as it appears on PubMed at http://www.pubmed.gov), where 20070943 is the PubMed ID number.
[[Category: Large Structures]]
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[[Category: Adams JJ]]
{{ABSTRACT_PUBMED_20070943}}
[[Category: Bayer EA]]
 
[[Category: Currie MA]]
==About this Structure==
[[Category: Jia Z]]
3KCP is a 2 chains structure with sequences from [http://en.wikipedia.org/wiki/Clostridium_thermocellum_atcc_27405 Clostridium thermocellum atcc 27405]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KCP OCA].
[[Category: Smith SP]]
 
==Reference==
<ref group="xtra">PMID:20070943</ref><references group="xtra"/>
[[Category: Clostridium thermocellum atcc 27405]]
[[Category: Adams, J J.]]
[[Category: Bayer, E A.]]
[[Category: Currie, M A.]]
[[Category: Jia, Z.]]
[[Category: Smith, S P.]]
[[Category: Carbohydrate metabolism]]
[[Category: Cell wall biogenesis/degradation]]
[[Category: Cellulose degradation]]
[[Category: Cellulosome]]
[[Category: Cohesin]]
[[Category: Dockerin]]
[[Category: Glycoprotein]]
[[Category: Polysaccharide degradation]]
[[Category: Secreted]]
[[Category: X-module]]
 
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Feb 10 17:11:56 2010''

Latest revision as of 13:16, 21 February 2024

Crystal structure of interacting Clostridium thermocellum multimodular componentsCrystal structure of interacting Clostridium thermocellum multimodular components

Structural highlights

3kcp is a 2 chain structure with sequence from Acetivibrio thermocellus ATCC 27405. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 1.94Å
Ligands:,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

CIPA_ACET2 Acts as a scaffolding protein in the cellulosome. It promotes binding of cellulose to the catalytic domains of the cellulolytic enzymes.

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

See Also

3kcp, resolution 1.94Å

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