3c5d: Difference between revisions

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-{{Seed}}
-[[Image:3c5d.png|left|200px]]
-<!--
+==Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin==
-The line below this paragraph, containing "STRUCTURE_3c5d", creates the "Structure Box" on the page.
+<StructureSection load='3c5d' size='340' side='right'caption='[[3c5d]], [[Resolution|resolution]] 1.80&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[3c5d]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5D OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3C5D FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 1.8&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=K:POTASSIUM+ION'>K</scene>, <scene name='pdbligand=LIV:(2R,3S,4S,5S,6R)-2-((2S,3S,4R,5R,6R)-5-AMINO-2-(AMINOMETHYL)-6-((2R,3S,4R,5S)-5-((1R,2R,3S,5R,6S)-3,5-DIAMINO-2-((2S,3R,5S,6R)-3-AMINO-5-HYDROXY-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-2-YLOXY)-6-HYDROXYCYCLOHEXYLOXY)-4-HYDROXY-2-(HYDROXYMETHYL)-TETRAHYDROFURAN-3-YLOXY)-4-HYDROXY-TETRAHYDRO-2H-PYRAN-3-YLOXY)-6-(HYDROXYMETHYL)-TETRAHYDRO-2H-PYRAN-3,4,5-TRIOL'>LIV</scene>, <scene name='pdbligand=UMS:2-METHYLSELENYL-2-DEOXYURIDINE-5-PHOSPHATE'>UMS</scene></td></tr>
-{{STRUCTURE_3c5d|  PDB=3c5d  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3c5d FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3c5d OCA], [https://pdbe.org/3c5d PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3c5d RCSB], [https://www.ebi.ac.uk/pdbsum/3c5d PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3c5d ProSAT]</span></td></tr>
+</table>
-===Crystal structure of HIV-1 subtype F DIS extended duplex RNA bound to lividomycin===
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
-==About this Structure==
+[[Category: Dumas P]]
-C5D is a 2 chains structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3C5D OCA].
+[[Category: Ennifar E]]
+[[Category: Freisz S]]
-==Reference==
+[[Category: Lang K]]
-<ref group="xtra">PMID:18435520</ref><references group="xtra"/>
+[[Category: Micura R]]
-[[Category: Dumas, P.]]
-[[Category: Ennifar, E.]]
-[[Category: Freisz, S.]]
-[[Category: Lang, K.]]
-[[Category: Micura, R.]]
-[[Category: Aminoglycoside]]
-[[Category: Extended duplex]]
-[[Category: Hiv-1]]
-[[Category: Lividomycin]]
-[[Category: Rna]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Mon Jan 18 09:07:30 2010''