1z05: Difference between revisions

Proteopedia Page Contributors and Editors (what is this?)Proteopedia Page Contributors and Editors (what is this?)

OCA

@@ Line 1: / Line 1: @@
-[[Image:1z05.gif|left|200px]]<br /><applet load="1z05" size="450" color="white" frame="true" align="right" spinBox="true"
-caption="1z05, resolution 2.00&Aring;" />
-'''Crystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.'''<br />
-==About this Structure==
+==Crystal structure of the ROK family transcriptional regulator, homolog of E.coli MLC protein.==
-Z05 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Vibrio_cholerae_o1_biovar_eltor Vibrio cholerae o1 biovar eltor] with ZN, SO4, BME and GOL as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://ispc.weizmann.ac.il/oca-bin/ocashort?id=1Z05 OCA].
+<StructureSection load='1z05' size='340' side='right'caption='[[1z05]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
-[[Category: Single protein]]
+== Structural highlights ==
-[[Category: Vibrio cholerae o1 biovar eltor]]
+<table><tr><td colspan='2'>[[1z05]] is a 1 chain structure with sequence from [https://en.wikipedia.org/wiki/Vibrio_cholerae_O1_biovar_El_Tor_str._N16961 Vibrio cholerae O1 biovar El Tor str. N16961]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1Z05 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=1Z05 FirstGlance]. <br>
-[[Category: Anderson, W.F.]]
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2&#8491;</td></tr>
-[[Category: Brunzelle, J.S.]]
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=BME:BETA-MERCAPTOETHANOL'>BME</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr>
-[[Category: Collart, F.R.]]
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=1z05 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1z05 OCA], [https://pdbe.org/1z05 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=1z05 RCSB], [https://www.ebi.ac.uk/pdbsum/1z05 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=1z05 ProSAT], [https://www.topsan.org/Proteins/MCSG/1z05 TOPSAN]</span></td></tr>
-[[Category: MCSG, Midwest.Center.for.Structural.Genomics.]]
+</table>
-[[Category: Minasov, G.]]
+== Function ==
-[[Category: Shuvalova, L.]]
+[https://www.uniprot.org/uniprot/Q9KQJ1_VIBCH Q9KQJ1_VIBCH]
-[[Category: BME]]
+== Evolutionary Conservation ==
-[[Category: GOL]]
+[[Image:Consurf_key_small.gif|200px|right]]
-[[Category: SO4]]
+Check<jmol>
-[[Category: ZN]]
+  <jmolCheckbox>
-[[Category: mcsg]]
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/z0/1z05_consurf.spt"</scriptWhenChecked>
-[[Category: midwest center for structural genomics]]
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
-[[Category: protein structure initiative]]
+    <text>to colour the structure by Evolutionary Conservation</text>
-[[Category: psi]]
+  </jmolCheckbox>
-[[Category: rok family]]
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=1z05 ConSurf].
-[[Category: structural genomics]]
+<div style="clear:both"></div>
-[[Category: transcriptional regulator]]
+__TOC__
+</StructureSection>
-''Page seeded by [http://ispc.weizmann.ac.il/oca OCA ] on Sun Nov 25 04:41:08 2007''
+[[Category: Large Structures]]
+[[Category: Vibrio cholerae O1 biovar El Tor str. N16961]]
+[[Category: Anderson WF]]
+[[Category: Brunzelle JS]]
+[[Category: Collart FR]]
+[[Category: Minasov G]]
+[[Category: Shuvalova L]]