3ks5: Difference between revisions

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[[Image:3ks5.jpg|left|200px]]


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==Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 2.05 A resolution==
The line below this paragraph, containing "STRUCTURE_3ks5", creates the "Structure Box" on the page.
<StructureSection load='3ks5' size='340' side='right'caption='[[3ks5]], [[Resolution|resolution]] 2.05&Aring;' scene=''>
You may change the PDB parameter (which sets the PDB file loaded into the applet)
== Structural highlights ==
or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
<table><tr><td colspan='2'>[[3ks5]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Agrobacterium_fabrum_str._C58 Agrobacterium fabrum str. C58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KS5 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=3KS5 FirstGlance]. <br>
or leave the SCENE parameter empty for the default display.
</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.05&#8491;</td></tr>
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<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
{{STRUCTURE_3ks5|  PDB=3ks5  |  SCENE=  }}
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=3ks5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ks5 OCA], [https://pdbe.org/3ks5 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=3ks5 RCSB], [https://www.ebi.ac.uk/pdbsum/3ks5 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=3ks5 ProSAT]</span></td></tr>
 
</table>
===Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 2.05 A resolution===
== Function ==
 
[https://www.uniprot.org/uniprot/A9CLR1_AGRFC A9CLR1_AGRFC]  
 
== Evolutionary Conservation ==
==About this Structure==
[[Image:Consurf_key_small.gif|200px|right]]
3KS5 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Agrobacterium_tumefaciens_str._c58 Agrobacterium tumefaciens str. c58]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KS5 OCA].  
Check<jmol>
[[Category: Agrobacterium tumefaciens str. c58]]
  <jmolCheckbox>
[[Category: JCSG, Joint Center for Structural Genomics.]]
    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ks/3ks5_consurf.spt"</scriptWhenChecked>
[[Category: Jcsg]]
    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
[[Category: Joint center for structural genomic]]
    <text>to colour the structure by Evolutionary Conservation</text>
[[Category: Plasmid]]
  </jmolCheckbox>
[[Category: Protein structure initiative]]
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=3ks5 ConSurf].
[[Category: Psi-2]]
<div style="clear:both"></div>
[[Category: Putative glycerophosphoryl diester phosphodiesterase]]
__TOC__
[[Category: Structural genomic]]
</StructureSection>
 
[[Category: Agrobacterium fabrum str. C58]]
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Dec  9 16:09:44 2009''
[[Category: Large Structures]]

Latest revision as of 05:02, 21 November 2024

Crystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 2.05 A resolutionCrystal structure of Putative glycerophosphoryl diester phosphodiesterase (17743486) from AGROBACTERIUM TUMEFACIENS str. C58 (Dupont) at 2.05 A resolution

Structural highlights

3ks5 is a 2 chain structure with sequence from Agrobacterium fabrum str. C58. Full crystallographic information is available from OCA. For a guided tour on the structure components use FirstGlance.
Method:X-ray diffraction, Resolution 2.05Å
Ligands:, , ,
Resources:FirstGlance, OCA, PDBe, RCSB, PDBsum, ProSAT

Function

A9CLR1_AGRFC

Evolutionary Conservation

Check, as determined by ConSurfDB. You may read the explanation of the method and the full data available from ConSurf.

3ks5, resolution 2.05Å

Drag the structure with the mouse to rotate

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