2zu7: Difference between revisions

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-{{Seed}}
-[[Image:2zu7.jpg|left|200px]]
-<!--
+==Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii==
-The line below this paragraph, containing "STRUCTURE_2zu7", creates the "Structure Box" on the page.
+<StructureSection load='2zu7' size='340' side='right'caption='[[2zu7]], [[Resolution|resolution]] 2.50&Aring;' scene=''>
-You may change the PDB parameter (which sets the PDB file loaded into the applet)
+== Structural highlights ==
-or the SCENE parameter (which sets the initial scene displayed when the page is loaded),
+<table><tr><td colspan='2'>[[2zu7]] is a 2 chain structure with sequence from [https://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZU7 OCA]. For a <b>guided tour on the structure components</b> use [https://proteopedia.org/fgij/fg.htm?mol=2ZU7 FirstGlance]. <br>
-or leave the SCENE parameter empty for the default display.
+</td></tr><tr id='method'><td class="sblockLbl"><b>[[Empirical_models|Method:]]</b></td><td class="sblockDat" id="methodDat">X-ray diffraction, [[Resolution|Resolution]] 2.5&#8491;</td></tr>
--->
+<tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat" id="ligandDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
-{{STRUCTURE_2zu7|  PDB=2zu7  |  SCENE=  }}
+<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[https://proteopedia.org/fgij/fg.htm?mol=2zu7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2zu7 OCA], [https://pdbe.org/2zu7 PDBe], [https://www.rcsb.org/pdb/explore.do?structureId=2zu7 RCSB], [https://www.ebi.ac.uk/pdbsum/2zu7 PDBsum], [https://prosat.h-its.org/prosat/prosatexe?pdbcode=2zu7 ProSAT]</span></td></tr>
+</table>
-===Crystal structure of mannosyl-3-phosphoglycerate synthase from Pyrococcus horikoshii===
+== Function ==
+[https://www.uniprot.org/uniprot/MPGS_PYRHO MPGS_PYRHO] Transfers a mannosyl group from GDP-mannose to phosphoglycerate to form mannosyl-3-phosphoglycerate (MPG). The enzyme is absolutely specific for GDP-mannose and 3-phosphoglycerate, and transfers the mannosyl group with retention of configuration.
+== Evolutionary Conservation ==
-==About this Structure==
+[[Image:Consurf_key_small.gif|200px|right]]
-ZU7 is a 2 chains structure of sequences from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2ZU7 OCA].
+Check<jmol>
-[[Category: Mannosyl-3-phosphoglycerate synthase]]
+  <jmolCheckbox>
+    <scriptWhenChecked>; select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/zu/2zu7_consurf.spt"</scriptWhenChecked>
+    <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview03.spt</scriptWhenUnchecked>
+    <text>to colour the structure by Evolutionary Conservation</text>
+  </jmolCheckbox>
+</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/main_output.php?pdb_ID=2zu7 ConSurf].
+<div style="clear:both"></div>
+__TOC__
+</StructureSection>
+[[Category: Large Structures]]
 [[Category: Pyrococcus horikoshii]]
-[[Category: Kawamura, T.]]
+[[Category: Kawamura T]]
-[[Category: Tanaka, I.]]
+[[Category: Tanaka I]]
-[[Category: Watanabe, N.]]
+[[Category: Watanabe N]]
-[[Category: Cytoplasm]]
-[[Category: Glycosyltransferase]]
-[[Category: Gt-a fold]]
-[[Category: Gt55]]
-[[Category: Magnesium]]
-[[Category: Transferase]]
-''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Wed Oct 28 13:45:07 2009''